Return to main results Retrieve Phyre Job Id

Job DescriptionP16528
Confidence88.20%DateThu Jan 5 11:35:13 GMT 2012
Rank285Aligned Residues46
% Identity11%Templated2hzta1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50... ......60.........70.........80 .......
Predicted Secondary structure 



.










.....




Query SS confidence 











.


























. . . . .






Query Sequence  GSVALTELAQQA. GLPNSTTHRLLTTMQQQGFVRQVGELG. . . . . HWAIGAH
Query Conservation      
 


  
.

  

  


 

   
 
       ..... 
 

  
Alig confidence 











.


























.....






Template Conservation 
  

 

 
 
 


   

 

  
   


 
      
  
 
 

  
Template Sequence  GKKRTSELKRLXPNITQKXLTQQLRELEADGVINRIVYNQVPPKVEYELSEY
Template Known Secondary structure 

B

TTS
TTS
SSS

TT
Template Predicted Secondary structure 

















Template SS confidence 



















































   26...30.........40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions