Job Description P16528 Confidence 97.65% Date Thu Jan 5 11:35:13 GMT 2012 Rank 44 Aligned Residues 78 % Identity 19% Template d2d1ha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	L	E	W	I	A	E	S	N	G	S	V	A	L	T	E	L	A	Q	Q	A	G	L	P	N	S	T	T	H	R	L	L	T	T	M	Q	Q	Q	G	F	V	R	Q	V	G	E	L	G	H	W	A	I	G	A	H	A	F	M	V	G	S	S	F	L	Q	S	R	N	L	L	A	I	V	H	P	I	L	R
Query Conservation
Alig confidence																																																.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	V	L	L	K	X	V	E	I	E	K	P	I	T	S	E	E	L	A	D	I	F	K	L	S	K	T	T	V	E	N	S	L	K	K	L	I	E	L	G	L	V	V	R	T	.	K	T	P	K	Y	Y	.	.	.	.	.	.	.	.	.	.	.	Y	S	I	S	S	N	I	L	E	K	I	R	N	D	L	L
Template Known Secondary structure													S												T																T	T	S					.							.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																																																.							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.												.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		111	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	M	E	E	S	G	E	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	C	A	K	R	X	E	L	A	A
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions