Return to main results Retrieve Phyre Job Id

Job DescriptionP16528
Confidence91.44%DateThu Jan 5 11:35:13 GMT 2012
Rank249Aligned Residues79
% Identity18%Templated1yyva1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like
Resolution2.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80. ........90.........100....
Predicted Secondary structure 


















.....







Query SS confidence 



















































. . . . .






















Query Sequence  GLKLLEWIAESNGSVALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGH. . . . . WAIGAHAFMVGSSFLQSRNLLAI
Query Conservation 

 

  

       
 


  


  

  


 

   
 
        .....
 

  
  

        
   
Alig confidence 








..










.




























.....





....












Template Conservation     

  
 .. 
  

 

 
.  

   

 

  
   


 
      
  


 

  ....
  
 

  
  
Template Sequence  GVLILVALR. . DGTHRFSDLRR. XGGVSEXLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPL. . . . GEQVSDVAALADW
Template Known Secondary structure  GG..G


.
TT



T

SSS

....

Template Predicted Secondary structure  ..




.















....
Template SS confidence 















































































   34.....40.. .......50... ......60.........70.........80.........90... ......100......
 
   105....110.....
Predicted Secondary structure 
Query SS confidence 










Query Sequence  VHPILRNLMEE
Query Conservation      
  

  
Alig confidence 










Template Conservation             
Template Sequence  IELNLPQVLAQ
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 










   110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions