Return to main results Retrieve Phyre Job Id

Job DescriptionP16528
Confidence82.65%DateThu Jan 5 11:35:13 GMT 2012
Rank423Aligned Residues41
% Identity20%Templated1d5ya1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40. ........50.........60........
Predicted Secondary structure 


.






Query SS confidence 













.


























Query Sequence  TRGLKLLEWIAESN. GSVALTELAQQAGLPNSTTHRLLTTMQ
Query Conservation   


 

  

   .    
 


  


  

  


 

 
Alig confidence 













.


























Template Conservation    
     

       
 
  

     
   
 
 

   
Template Sequence  GIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVT
Template Known Secondary structure  TTSSSS


TTTSS
Template Predicted Secondary structure 








Template SS confidence 









































   5....10.........20.........30.........40......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions