Job Description P16528 Confidence 79.46% Date Thu Jan 5 11:35:13 GMT 2012 Rank 470 Aligned Residues 155 % Identity 14% Template c3oovA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein, putative; PDBTitle: crystal structure of a methyl-accepting chemotaxis protein, residues2 122 to 287 Resolution 2.20 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		M	V	G	S	S	F	L	Q	S	R	N	L	L	A	I	V	H	P	I	L	R	N	L	M	E	E	S	G	E	.	T	V	N	M	A	V	L	D	Q	S	D	H	E	A	I	I	I	D	Q	V	Q	C	T	H	L	M	R	M	S	A	P	I	G	G	K	L	P	M	H	A	S	G	A	G	K	A	F	L	A	Q
Query Conservation																															.
Alig confidence																															.																											.	.
Template Conservation																																																										.	.
Template Sequence		Q	I	S	S	R	I	Q	K	S	I	D	V	D	E	V	L	R	L	C	A	E	G	L	H	D	V	L	G	Y	E	R	V	N	I	L	X	A	D	T	A	R	T	S	L	S	F	V	A	A	V	G	T	A	D	F	N	.	.	P	A	G	V	V	L	P	L	D	Q	R	G	G	V	I	T	K	C	F	T	D	R
Template Known Secondary structure																											T	T			S									T	T	S	S									S		S	S			.	.		T	T					S	S	G	G	G										T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		L	S	E	E	Q	V	T	K	L	L	H	R	K	G	L	H	A	Y	T	H	A	T	L	V	S	P	V	H	L	K	E	D	L	A	Q	T	R	K	R	G	Y	S	F	D	D	E	E	H	A	L	G	L	R	C	L	A	A	C	I	F	D	E	H	R	E	P	F	A	A	I	S	I	S	G	P	I	.	.	S	R
Query Conservation																																																																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.										.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Q	V	Y	X	I	D	D	V	S	A	Y	P	T	D	F	R	L	Q	S	P	Y	D	A	I	R	A	L	R	S	.	.	.	.	.	.	.	.	.	.	K	S	F	V	I	C	P	I	V	.	V	K	G	E	A	I	G	V	F	A	V	D	N	R	S	S	R	R	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.						S		G	G	G	S		G	G	G	S			T	T	G	G	G		G	G	G			.	.	.	.	.	.	.	.	.	.	S	S								.		T	T											T	T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
														81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	D	D	R	V	T	E	F	G	A	M	V	I	K	A	A	K	E	V	T	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	D	T	D	V	D	T	I	K	L	F	A	D	Q	A	S	S	A	I	V	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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