Job Description P16528 Confidence 100.00% Date Thu Jan 5 11:35:13 GMT 2012 Rank 11 Aligned Residues 173 % Identity 24% Template c3obfA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative transcriptional regulator, iclr family; PDBTitle: crystal structure of putative transcriptional regulator, iclr family;2 targeted domain 129...302 Resolution 2.16 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	R	N	L	L	A	I	V	H	P	I	L	R	N	L	M	E	E	S	G	E	T	V	N	M	A	V	L	D	Q	S	D	H	E	A	I	I	I	D	Q	V	Q	C	T	H	L	M	R	M	S	A	P	I	G	G	K	L	P	M	H	A	S	G	A	G	K	A	F	L	A	Q	L	S	E	E	Q	V	T	K
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		S	N	A	E	E	R	R	V	A	Y	P	V	L	R	E	L	T	E	R	T	G	E	T	S	A	L	X	V	W	N	G	N	E	.	.	S	X	C	V	E	Q	I	P	S	R	H	Q	V	K	H	L	A	P	L	G	A	R	Y	N	E	A	L	S	S	S	V	Q	V	F	L	A	S	E	N	E	D	R	V	R	Q
Template Known Secondary structure																						S	S									S	S		.	.										T	T		S	S			S		T	T					B	T	T	S									T	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	H	R	K	G	L	H	A	Y	T	H	A	T	L	V	S	P	V	H	L	K	E	D	L	A	Q	T	R	K	R	G	Y	S	F	D	D	E	E	H	A	L	G	L	R	C	L	A	A	C	I	F	D	E	H	R	E	P	F	A	A	I	S	I	S	G	P	I	S	R	I	T	D	D	R	V	T	E	F	G
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		L	L	R	S	G	S	I	.	T	L	T	G	V	D	E	D	A	V	E	A	Y	L	L	R	L	K	E	S	X	E	R	G	W	A	V	N	F	G	E	T	S	I	E	E	V	G	V	A	S	P	V	Y	D	H	R	G	N	X	V	A	S	V	L	I	P	A	P	K	F	R	V	S	Q	D	T	L	N	S	L	G
Template Known Secondary structure						T	S	S	.	B		T	T																				T	S					S	S	S	S	T	T											T	T	S												G	G	G
Template Predicted Secondary structure									.
Template SS confidence
		204	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	V	I	K	A	A	K	E	V	T	L	A	Y	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	C	A	A	A	A	A	K	V	T	T	R	L	G	G
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions