Job Description P16528 Confidence 96.75% Date Thu Jan 5 11:35:13 GMT 2012 Rank 142 Aligned Residues 101 % Identity 8% Template c2cfxD_ PDB info PDB header:transcription Chain: D: PDB Molecule:hth-type transcriptional regulator lrpc; PDBTitle: structure of b.subtilis lrpc Resolution 2.4 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	L	E	W	I	A	E	S	N	G	S	V	A	L	T	E	L	A	Q	Q	A	G	L	P	N	S	T	T	H	R	L	L	T	T	M	Q	Q	Q	G	F	V	R	Q	V	G	E	L	G	H	W	A	I	G	A	H	A	F	M	V	G	S	S	F	L	Q	S	R	N	L	L	A	I	V	H	P	I	L	R
Query Conservation
Alig confidence									.																																				.	.	.	.
Template Conservation									.																																				.	.	.	.
Template Sequence		L	N	I	I	E	E	L	.	K	K	D	S	R	L	S	M	R	E	L	G	R	K	I	K	L	S	P	P	S	V	T	E	R	V	R	Q	L	E	S	F	G	I	I	.	.	.	.	K	Q	Y	T	L	E	V	D	Q	K	K	L	G	L	P	V	S	C	I	V	E	A	T	V	K	N	A	D	Y	E	R	F	K
Template Known Secondary structure									.	T	T		S												T																T	T	S	S	.	.	.	.									T	T	T	T	T												S	T	T
Template Predicted Secondary structure									.																																				.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	M	E	E	S	G	E	T	V	N	M	A	V	L	D	Q	S	D	H	E	A	I	I	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	I	Q	T	L	P	N	I	E	F	C	Y	R	I	A	G	A	A	C	Y	M	L	K	I	N
Template Known Secondary structure					T	T		S	S								S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions