Job Description P16528 Confidence 100.00% Date Thu Jan 5 11:35:13 GMT 2012 Rank 12 Aligned Residues 164 % Identity 30% Template c1yspA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator kdgr; PDBTitle: crystal structure of the c-terminal domain of e. coli transcriptional2 regulator kdgr. Resolution 1.80 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	L	L	A	I	V	H	P	I	L	R	N	L	M	E	E	S	G	E	T	V	N	M	A	V	L	D	Q	S	D	H	E	A	I	I	I	D	Q	V	Q	C	T	H	L	M	R	M	S	A	P	I	G	G	K	L	P	M	H	A	S	G	A	G	K	A	F	L	A	Q	L	S	E	E	Q	V	T	K	L	L
Query Conservation
Alig confidence																															.	.												.	.	.	.	.	.	.	.
Template Conservation																															.	.												.	.	.	.	.	.	.	.
Template Sequence		M	D	L	I	R	S	A	D	I	Q	M	R	E	L	S	R	L	T	K	E	T	I	H	L	G	A	L	D	E	.	.	D	S	I	V	Y	I	H	K	I	D	S	.	.	.	.	.	.	.	.	M	I	G	R	R	N	P	L	Y	S	T	A	I	G	K	V	L	L	A	W	R	D	R	D	E	V	K	Q	I	L
Template Known Secondary structure																														T	.	.	T											.	.	.	.	.	.	.	.								S	S	S	S									T	S
Template Predicted Secondary structure																															.	.												.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	K	G	L	H	A	Y	T	H	A	T	L	V	S	P	V	H	L	K	E	D	L	A	Q	T	R	K	R	G	Y	S	F	D	D	E	E	H	A	L	G	L	R	C	L	A	A	C	I	F	D	E	H	R	E	P	F	A	A	I	S	I	S	G	P	I	S	R	I	T	D	D	R	V	T	E	F	G	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	V	E	Y	K	R	S	T	E	R	T	I	T	S	T	E	A	L	L	P	V	L	D	Q	V	R	E	Q	G	Y	G	E	D	N	E	E	Q	E	E	G	L	R	C	I	A	V	P	V	F	D	R	F	G	V	V	I	A	G	L	S	I	S	F	P	T	L	R	F	S	E	E	R	L	Q	E	Y	V	A	M
Template Known Secondary structure		T	T							S	T	T				S															T						S	S	S	S	T	T	B										T	T	S											B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	K	A	A	K	E	V	T	L	A	Y	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	T	A	A	R	K	I	S	A	Q	M	G	Y
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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