Job Description P16528 Confidence 97.67% Date Thu Jan 5 11:35:13 GMT 2012 Rank 42 Aligned Residues 236 % Identity 11% Template c1stzB_ PDB info PDB header:transcription Chain: B: PDB Molecule:heat-inducible transcription repressor hrca homolog; PDBTitle: crystal structure of a hypothetical protein at 2.2 a resolution Resolution 2.20 Å

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		28	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.														.	.																																																.	.
Query SS confidence														.	.	.	.														.	.																																																.	.
Query Sequence		T	R	G	L	K	L	L	E	W	I	A	E	.	.	.	.	S	N	G	S	V	A	L	T	E	L	A	Q	Q	.	.	A	G	L	P	N	S	T	T	H	R	L	L	T	T	M	Q	Q	Q	G	F	V	R	Q	V	G	E	L	G	H	W	A	I	G	A	H	A	F	M	V	G	S	S	F	L	Q	S	R	.	.
Query Conservation														.	.	.	.														.	.																																																.	.
Alig confidence														.	.	.	.														.	.																																																.	.
Template Conservation
Template Sequence		D	R	Q	R	K	V	L	Y	C	I	V	R	E	Y	I	E	N	K	K	P	V	S	S	Q	R	V	L	E	V	S	N	I	E	F	S	S	A	T	I	R	N	D	M	K	K	L	E	Y	L	G	Y	I	Y	Q	P	H	T	S	A	G	R	I	P	T	D	K	G	L	R	F	Y	Y	E	E	M	L	K	I	S	M
Template Known Secondary structure																				S		B									S				S															T	T	S					S	S		S		B
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	N	L	L	A	I	V	H	P	I	L	R	N	L	M	E	E	S	G	E	T	V	N	M	A	V	L	D	Q	S	D	H	E	A	I	I	I	D	Q	V	Q	C	T	H	L	M	R	M	S	A	P	I	G	G	K	L	P	M	H	A	S	G	A	G	K	A	F	L	A	Q	L	S	E	E	Q	V	T	K
Query Conservation		.	.	.
Alig confidence		.	.	.																																																															.	.
Template Conservation																																																																			.	.
Template Sequence		P	L	A	D	P	E	K	V	L	F	L	A	G	N	L	L	A	R	L	T	E	G	Y	V	L	I	E	R	P	N	T	R	D	L	K	I	L	R	V	M	L	I	P	V	S	E	D	Y	L	I	F	S	I	L	T	E	F	G	V	S	K	V	T	P	I	.	.	K	T	Q	E	R	L	N	W	E	E	I	E	R
Template Known Secondary structure																						T										T	T	S		B										S	S	S									T	T									.	.			S	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.
		177	.	.	180																																									.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query Sequence		L	L	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	L	H	A	Y	T	H	A	T	L	V	S	P	V	H	L	K	E	D	L	A	Q	T	R	K	R	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	N	F	L	L	R	G	R	T	V	G	E	V	L	M	G	K	I	E	S	L	K	G	S	G	F	L	R	L	I	E	S	L	I	G	E	T	V	E	R	Y	L	D	A	G	L	E	N	L	L	K	D	E	T	L	T	L	E	D	I	R	N	L	L	E	E	V	K	D	Q	K	F	L	E	S	L	V	G	E
Template Known Secondary structure								T	T		B						T	T			G	G	G	G	S	S											T					S												S	T	T													T	T											S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		G	Y	S	F	D	D	E	E	H	A	.	.	.	.	.	L	G	L	R	C	L	A	A	C	I	F	D	E	H	R	E	P	F	A	A	I	S	I	S	G	P	I	S	R	I	T	D	D	R	V	T	E	F	G	A	M	V	I	K	A	A	K	E	V	T	L	A	Y
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.												.																.					.	.	.
Template Conservation																												.																.					.	.	.
Template Sequence		G	I	T	V	R	I	G	R	E	I	G	R	K	K	L	E	K	F	A	V	F	S	G	K	Y	F	.	K	G	E	S	P	I	G	S	V	Y	L	F	T	S	K	.	V	T	K	Y	.	.	.	D	R	N	H	R	V	F	E	Y	I	L	N	R	L	S	E	Y	F
Template Known Secondary structure		S	S					G	G	G	G	S		G	G	G	T	T										.		T	T												S	.	S	S			.	.	.
Template Predicted Secondary structure																												.																.					.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions