Job Description P0AF63 Confidence 36.48% Date Thu Jan 5 11:25:20 GMT 2012 Rank 440 Aligned Residues 61 % Identity 15% Template d2ns0a1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain RHA1 ro06458-like Resolution 2.00

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Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																												.	.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		A	L	I	Y	M	A	S	L	P	E	G	R	M	T	S	I	S	E	V	T	D	V	Y	G	V	S	.	.	.	.	.	R	N	H	M	V	K	I	I	N	Q	L	S	R	A	G	Y	V	T	A	V	R	G	K	N	.	.	.	.	.	.	.	.	G	G	I	R	L	G	K	P	A	S	A
Query Conservation																												.	.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	A	L	L	D	A	R	A	D	S	A	S	I	C	P	S	D	V	A	R	A	V	A	P	D	D	W	R	P	L	X	E	P	V	R	E	A	A	G	R	L	A	D	A	G	E	V	E	V	T	Q	K	G	A	V	V	D	P	R	S	A	R	G	P	I	R	I	R	W	T	R	T	D
Template Known Secondary structure									S		T	T			B											T	T	S		G	G	G														T	T	S						T	T					T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions