Job Description P0AF63 Confidence 95.18% Date Thu Jan 5 11:25:20 GMT 2012 Rank 134 Aligned Residues 62 % Identity 18% Template d2b0la1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CodY HTH domain Resolution 2.90

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		L	T	S	F	T	D	Y	G	L	R	A	L	I	Y	M	A	S	L	P	E	G	R	M	T	S	I	S	E	V	T	D	V	Y	G	V	S	R	N	H	M	V	K	I	I	N	Q	L	S	R	A	G	Y	V	T	A	V	R	.	G	K	N	G	G	I
Query Conservation																																																											.
Alig confidence																	.																																										.
Template Conservation																	.
Template Sequence		L	S	Y	S	E	L	E	A	I	E	H	I	F	E	E	.	L	D	G	N	E	G	L	L	V	A	S	K	I	A	D	R	V	G	I	T	R	S	V	I	V	N	A	L	R	K	L	E	S	A	G	V	I	E	S	R	S	L	G	M	K	G	T	Y
Template Known Secondary structure		S												T	T	S	.	S	B	T	T														T																T	T	S							S	S	S
Template Predicted Secondary structure																	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions