Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF63
Confidence29.74%DateThu Jan 5 11:25:20 GMT 2012
Rank472Aligned Residues47
% Identity19%Templated1yg2a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30..... ....40.........50.........
Predicted Secondary structure 







....






Query SS confidence 






















. . . .























Query Sequence  ALIYMASLPEGRMTSISEVTDVY. . . . GVSRNHMVKIINQLSRAGYVTAVR
Query Conservation   
  

        
   

   .... 
    
 


  
  



 
 
Alig confidence 






















....























Template Conservation 




   
  



           
  
 



  
 


  


   
Template Sequence  ILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVL
Template Known Secondary structure 

B
TTGGGGT



TTS

Template Predicted Secondary structure 





















Template SS confidence 


















































   7..10.........20.........30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions