Job Description P0AF63 Confidence 99.95% Date Thu Jan 5 11:25:20 GMT 2012 Rank 5 Aligned Residues 116 % Identity 17% Template d1xd7a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.30

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	F	T	D	Y	G	L	R	A	L	I	Y	M	A	S	L	P	E	G	R	M	T	S	I	S	E	V	T	D	V	Y	G	V	S	R	N	H	M	V	K	I	I	N	Q	L	S	R	A	G	Y	V	T	A	V	R	G	K	N	G	G	I	R	L	G	K	P	A	S	A	I	R	I	G	D	V	V	R	E	L
Query Conservation
Alig confidence							.												.	.	.																																											.
Template Conservation							.												.	.	.																																											.
Template Sequence		S	R	L	A	V	.	A	I	H	I	L	S	L	I	S	M	D	.	.	.	E	K	T	S	S	E	I	I	A	D	S	V	N	T	N	P	V	V	V	R	R	M	I	S	L	L	K	K	A	D	I	L	T	S	R	A	G	V	P	G	A	S	.	L	K	K	D	P	A	D	I	S	L	L	E	V	Y	R	A	V
Template Known Secondary structure							.										T		.	.	.	S												T	S															T	T	S					S	S	S	S	S			.		S	S		G	G	G		B
Template Predicted Secondary structure							.												.	.	.																																											.
Template SS confidence
		6	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	L	S	L	V	N	C	S	S	E	F	C	H	I	T	P	A	C	R	L	K	Q	A	L	S	K	A	V	Q	S	F	L	T	E	L	D	N	Y	T	L	A	D	L	V	E
Query Conservation
Alig confidence															.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		Q	K	N	P	K	C	P	V	G	K	K	I	Q	.	.	.	.	.	N	A	L	D	E	T	F	E	S	V	Q	R	A	M	E	N	E	L	A	S	K	S	L	K	D	V	M	N
Template Known Secondary structure							S								.	.	.	.	.																			T	T		B
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions