Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF63
Confidence97.20%DateThu Jan 5 11:25:20 GMT 2012
Rank38Aligned Residues51
% Identity18%Templated1ub9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60....
Predicted Secondary structure 



















Query SS confidence 





















































Query Sequence  LRALIYMASLPEGRMTSISEVTDVYGVSRNHMVKIINQLSRAGYVTAVRGKNGG
Query Conservation 
  
  

        
   

    
    
 


  
  



 
 

  

Alig confidence 











...






































Template Conservation    

  
     ... 
  


  
 

   

  
  

  


       

Template Sequence  LGIMIFLLPRRK. . . APFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADR
Template Known Secondary structure  S...TT

TTS
SSS
Template Predicted Secondary structure 


...









Template SS confidence 





















































   1920.........30 .........40.........50.........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions