 |
Job Description | P0AF63 | Confidence | 91.82% | Date | Thu Jan 5 11:25:20 GMT 2012 |
Rank | 207 | Aligned Residues | 52 |
% Identity | 13% | Template | d1dpua_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| C-terminal domain of RPA32
|
Resolution | UNK |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | Y | G | L | R | A | L | I | Y | M | A | S | L | P | E | G | R | M | T | S | I | S | E | V | T | D | V | Y | . |
G | V | S | R | N | H | M | V | K | I | I | N | Q | L | S | R | A | G | Y | V | T | A | V |
Query Conservation |   |
  |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   | . |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |
|
|
|
|
Template Sequence |   |
T | V | A | Q | N | Q | V | L | N | L | I | K | A | C | P | R | P | E | G | L | N | F | Q | D | L | K | N | Q | L | K | H | M | S | V | S | S | I | K | Q | A | V | D | F | L | S | N | E | G | H | I | Y | S | T |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|