Job Description P0AF63 Confidence 94.47% Date Thu Jan 5 11:25:20 GMT 2012 Rank 157 Aligned Residues 69 % Identity 10% Template c4a5mH_ PDB info PDB header:transcription Chain: H: PDB Molecule:uncharacterized hth-type transcriptional regulator yybr; PDBTitle: redox regulator hypr in its oxidized form Resolution 3.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																													.																														.	.	.	.
Query SS confidence																													.																														.	.	.	.
Query Sequence		Y	G	L	R	A	L	I	Y	M	A	S	L	P	E	G	R	M	T	S	I	S	E	V	T	D	V	Y	.	G	V	S	R	N	H	M	V	K	I	I	N	Q	L	S	R	A	G	Y	V	T	A	V	R	G	K	N	G	G	.	.	.	.	I	R	L	G	K	P	A	S	A	I	R	I	G	D	V	V	R	E	L
Query Conservation																													.																														.	.	.	.
Alig confidence											.	.	.	.															.																														.	.	.	.					.	.
Template Conservation											.	.	.	.																																																					.	.
Template Sequence		W	K	G	I	L	F	Y	H	M	.	.	.	.	I	D	G	K	K	R	F	N	E	F	R	R	I	C	P	S	I	T	Q	R	M	L	T	L	Q	L	R	E	L	E	A	D	G	I	V	H	R	E	V	Y	H	Q	V	P	P	K	V	E	Y	S	L	T	.	.	E	F	G	R	T	L	E	P	I	V	L	Q	M
Template Known Secondary structure		S									.	.	.	.		T	S											S	T	T	S															T	T	S							S	S	S	S									.	.	T	T	G	G	G	G
Template Predicted Secondary structure											.	.	.	.																																																					.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions