Job Description P0AF63 Confidence 31.33% Date Thu Jan 5 11:25:20 GMT 2012 Rank 466 Aligned Residues 47 % Identity 15% Template c2k6xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																.		.	.	.	.
Query SS confidence																																.		.	.	.	.
Query Sequence		F	T	D	Y	G	L	R	A	L	I	Y	M	A	S	L	P	E	G	R	M	T	S	I	S	E	V	T	D	V	Y	.	G	.	.	.	.	V	S	R	N	H	M	V	K	I	I	N	Q	L	S	R	A	G	Y
Query Conservation																																.		.	.	.	.
Alig confidence																.	.															.		.	.	.	.
Template Conservation																.	.
Template Sequence		Q	I	E	R	R	I	K	K	L	I	S	L	G	K	.	.	K	K	G	Y	I	T	Y	E	D	I	D	K	A	F	P	P	D	F	E	G	F	D	T	N	L	I	E	R	I	H	E	E	L	E	K	H	G	I
Template Known Secondary structure																.	.			S	S		B									S		S		S	S																T
Template Predicted Secondary structure																.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions