Job Description P0AF63 Confidence 88.85% Date Thu Jan 5 11:25:20 GMT 2012 Rank 238 Aligned Residues 52 % Identity 19% Template c1kgsA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima Resolution 1.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.														.	.	.
Query SS confidence																											.	.	.	.														.	.	.
Query Sequence		L	I	Y	M	A	S	L	P	E	G	R	M	T	S	I	S	E	V	T	D	V	Y	G	V	S	.	.	.	.	R	N	H	M	V	K	I	I	N	Q	L	S	R	.	.	.	A	G	Y	V	T	A	V	R	G	K	N	G	G	I	R	L
Query Conservation																											.	.	.	.														.	.	.
Alig confidence																											.	.	.	.														.	.	.										.	.
Template Conservation																																																								.	.
Template Sequence		I	L	E	Y	L	V	X	N	K	N	R	V	V	T	K	E	E	L	Q	E	H	L	W	V	F	S	D	V	L	R	S	H	I	K	N	L	R	K	K	V	D	K	G	F	K	K	K	I	I	H	T	V	R	G	.	.	I	G	Y	V	A
Template Known Secondary structure									T	T	T	S																															T	T		S	S							T	T	.	.	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions