 |
Job Description | P0AF63 | Confidence | 97.35% | Date | Thu Jan 5 11:25:20 GMT 2012 |
Rank | 27 | Aligned Residues | 55 |
% Identity | 24% | Template | c1j5yA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulator, biotin repressor family; |
PDBTitle: crystal structure of transcriptional regulator (tm1602) from2 thermotoga maritima at 2.3 a resolution
|
Resolution | 2.30 Å |
|
 |
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | L | I | Y | M | A | S | L | P | E | G | R | M | T | S | I | S | E | V | T | D | V | Y | G | V | S | R | N | H | M | V | K | I | I | N | Q | L | S | R | A | G | Y | . |
V | T | A | V | R | G | K | N | G | G | I | R | L | G | K | P | A |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|
|
| . |
|   |
|   |
|
|   |   |
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |   |   | . | . |   |
|
|   |   |   |
|
|   |   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|
|   | . | . | . |   |
|
|   |
|   |   |   |   |
Template Sequence |   |
S | I | V | R | I | L | E | R | S | K | E | . |
. |
P | V | S | G | A | Q | L | A | E | E | L | S | V | S | R | Q | V | I | V | Q | D | I | A | Y | L | R | S | L | G | Y | N | I | V | A | T | P | . |
. |
. |
R | G | Y | V | L | A | G | G | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| S | S | . | . |
| B |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  | T | . | . | . | T |  |  |  |
|
| T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . |
|
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | |
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
60 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|