Job Description Q6IFZ3 Confidence 100.00% Date Thu Jan 5 12:37:36 GMT 2012 Rank 18 Aligned Residues 259 % Identity 20% Template d2dcna1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.25

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.										20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.
Query Sequence		T	L	A	T	I	G	D	N	C	V	D	I	Y	P	Q	L	N	.	.	.	.	.	.	.	.	.	K	A	F	S	G	G	N	A	V	N	V	A	V	Y	C	T	R	Y	G	I	Q	P	G	C	I	T	W	V	G	D	D	D	Y	G	T	K	L	K	Q	D	L	A	R	M	G	V	D	I	S	H	V	H	T	K
Query Conservation																			.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	I	T	L	G	E	I	L	I	E	F	N	A	L	S	P	G	P	L	R	H	V	S	Y	F	E	K	H	V	A	G	S	E	A	N	Y	C	V	A	F	I	K	Q	G	N	E	C	G	I	I	A	K	V	G	D	D	E	F	G	Y	N	A	I	E	W	L	R	G	Q	G	V	D	V	S	H	M	K	I	D
Template Known Secondary structure							S									S	S	S	S		G	G	G																						T	T											S	S													T	T		B		T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																.	.	.	.	.																																					.	.	.	.	.
Query SS confidence																.	.	.	.	.																																					.	.	.	.	.
Query Sequence		H	G	V	T	A	Q	T	Q	V	E	L	H	D	N	.	.	.	.	.	D	R	V	F	G	D	Y	T	E	G	V	M	A	D	F	A	L	S	E	E	D	Y	A	W	L	A	Q	Y	D	I	V	H	A	A	I	W	.	.	.	.	.	G	H	A	E	D	A	F	P	Q	L	H	A	A	G	K	L	T	A	F	D
Query Conservation																.	.	.	.	.																																					.	.	.	.	.
Alig confidence																.	.	.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		P	S	A	P	T	G	I	F	F	I	Q	R	H	Y	P	V	P	L	K	S	E	S	I	Y	Y	R	K	G	S	A	G	S	K	L	S	P	E	D	V	D	E	E	Y	V	K	S	A	D	L	V	H	S	S	G	I	T	L	A	I	S	S	T	A	K	E	A	V	Y	K	A	F	E	I	A	S	N	R	S	F	D
Template Known Secondary structure		T	T	S										S		S	S	T	T									T	T		T	G	G	G			G	G	G							T	T		S											S																S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		F	S	D	K	W	D	S	P	L	W	Q	T	L	V	P	H	L	.	.	.	.	.	.	.	.	.	D	F	A	F	A	S	A	P	Q	E	D	E	T	L	R	.	.	.	.	L	K	M	K	A	I	V	A	R	G	A	G	T	V	I	V	T	L	G	E	N	G	S	I	A	W	D	G	A	Q	F	W	R	Q	A
Query Conservation																			.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		T	N	I	R	L	K	L	W	S	A	E	E	A	K	R	E	I	L	K	L	L	S	K	F	H	L	K	F	L	I	T	D	T	D	D	S	K	I	I	L	G	E	S	D	P	D	K	A	A	K	A	F	S	D	Y	A	E	I	I	V	M	K	L	G	P	K	G	A	I	V	Y	Y	D	G	K	K	Y	Y	S	S
Template Known Secondary structure						T	T	T	S																																	S												T	T	T										T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	P	V	T	V	I	D	T	M	G	A	G	D	S	F	I	A	G	F	L	C	G	W	S	A	G	M	T	L	P	Q	A	I	A	Q	G	T	A	C	A	A	K	T	I	Q	Y	H	G	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	Q	V	P	V	E	D	V	T	G	A	G	D	A	L	G	G	T	F	L	S	L	Y	Y	K	G	F	E	M	E	K	A	L	D	Y	A	I	V	A	S	T	L	N	V	M	I	R	G	D	Q
Template Known Secondary structure								S			T	T														T	T	T																		T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions