Job Description Q6IFZ3 Confidence 100.00% Date Thu Jan 5 12:37:36 GMT 2012 Rank 20 Aligned Residues 258 % Identity 22% Template c3lhxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ketodeoxygluconokinase; PDBTitle: crystal structure of a ketodeoxygluconokinase (kdgk) from2 shigella flexneri Resolution 1.87 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		K	T	L	A	T	I	G	D	N	C	V	D	I	Y	P	Q	L	N	K	A	F	S	G	G	N	A	V	N	V	A	V	Y	C	T	R	Y	.	.	.	.	G	I	Q	P	G	C	I	T	W	V	G	D	D	D	Y	G	T	K	L	K	Q	D	L	A	R	M	G	V	D	I	S	H	V	H	T	K	H	G	V	T
Query Conservation																																						.	.	.	.
Alig confidence																						.																.	.	.	.
Template Conservation																						.
Template Sequence		K	K	I	A	V	I	G	E	C	X	I	E	L	S	E	D	V	K	R	G	.	F	G	G	D	T	L	N	T	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	V	H	Y	V	T	A	L	G	T	D	S	F	S	Q	Q	X	L	D	A	W	H	G	E	N	V	D	T	S	L	T	Q	R	X	E	N	R	L
Template Known Secondary structure								S														.														T	T	S		T	T	T											S	S												T	T	T				T	T					T	T
Template Predicted Secondary structure																						.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	T	Q	V	E	L	H	D	N	D	R	V	F	G	D	Y	T	E	G	V	M	A	D	F	A	L	S	E	E	.	.	D	Y	A	W	L	A	Q	Y	D	I	V	H	A	A	I	W	G	H	A	.	.	.	.	.	.	.	.	.	.	E	D	A	F	P	Q	L	H	A	A	G	K	L	T	A	F	D	F	S
Query Conservation																																.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	L	Y	Y	I	E	T	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	A	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L	L	S	L	L	R	E	C	R	A	K	G	G	K	V	I	F	D	N	N
Template Known Secondary structure																		T	T		G	G	G	G	T	T	S	S	S	S									T	T		S											T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		146	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.																							.	.	.	.	.																																				.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.																							.	.	.	.	.																																				.	.	.	.
Query Sequence		D	K	W	D	S	P	.	.	.	.	.	.	.	.	L	W	Q	T	L	V	P	H	L	D	F	A	F	A	S	A	P	Q	E	D	E	T	.	.	.	.	.	L	R	L	K	M	K	A	I	V	A	R	G	A	G	T	V	I	V	T	L	G	E	N	G	S	I	A	W	D	G	A	Q	F	W	R	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.																							.	.	.	.	.																																				.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																							.	.	.	.	.																																				.	.	.	.
Template Conservation
Template Sequence		Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	X	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	G	Q	Q	P	V	E	D	V	I	A	R	T	H	N	A	G	V	K	E	V	V	V	K	R	G	A	D	S	C	L	V	S	I	A	G	E	A	L	V	D	V	P	A
Template Known Secondary structure				G	G	G	S	S														T	T		S																												T	T		S							T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	P	E	P	V	T	V	I	D	T	M	G	A	G	D	S	F	I	A	G	F	L	C	G	W	S	A	G	M	T	L	P	Q	A	I	A	Q	G	T	A	C	A	A	K	T	I	Q	Y	H	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T	G	G	S	A	E	N	A	A	K	R	G	H	L	T	A	S	T	V	I	Q	Y	R	G	A
Template Known Secondary structure						G	G	G					T	T														T	T	T																		T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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