Job Description Q6IFZ3 Confidence 100.00% Date Thu Jan 5 12:37:36 GMT 2012 Rank 36 Aligned Residues 257 % Identity 16% Template c3kd6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, pfkb family; PDBTitle: crystal structure of nucleoside kinase from chlorobium tepidum in2 complex with amp Resolution 1.88 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																						.																															.
Query SS confidence																		.	.	.																						.																															.
Query Sequence		L	A	T	I	G	D	N	C	V	D	I	Y	P	Q	L	N	.	.	.	K	A	F	S	G	G	N	A	V	N	V	A	V	Y	C	T	R	Y	G	I	Q	.	P	G	C	I	T	W	V	G	D	D	D	Y	G	T	K	L	K	Q	D	L	A	R	M	G	V	D	I	S	H	V	.	H	T	K	H	G	V	T	A
Query Conservation																		.	.	.																						.																															.
Alig confidence																		.	.	.																						.											.																				.
Template Conservation																																																					.
Template Sequence		L	L	V	I	G	S	L	A	F	D	D	I	E	T	P	F	G	R	S	D	N	T	L	G	G	S	S	T	Y	I	A	L	S	A	S	Y	F	T	D	E	P	I	R	X	V	G	V	V	G	S	D	.	F	G	K	E	H	F	D	L	L	H	A	K	N	I	D	T	R	G	I	Q	V	I	E	D	G	K	T	F
Template Known Secondary structure						S										S	S																			T	T	T		S	S										T	T	.	S											T	T										T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.
Predicted Secondary structure																																													.	.																											.	.
Query SS confidence																																													.	.																											.	.
Query Sequence		Q	T	Q	V	E	L	H	D	N	D	R	V	F	G	D	Y	T	E	G	V	M	A	D	F	A	L	S	E	E	D	Y	A	W	L	A	Q	Y	D	I	V	H	A	A	.	.	I	W	G	H	A	E	D	A	F	P	Q	L	H	A	A	G	K	L	T	A	F	D	F	S	D	K	.	.	W	D	S	P	L	W	Q
Query Conservation																																													.	.																											.	.
Alig confidence																																													.	.																											.	.
Template Conservation
Template Sequence		R	W	A	G	R	Y	H	Y	D	X	N	T	R	D	T	L	D	T	Q	L	N	V	F	A	E	F	D	P	H	V	P	Q	Y	Y	R	D	S	K	F	V	C	L	G	N	I	D	P	E	L	Q	L	K	V	L	D	Q	I	D	D	P	K	L	V	V	C	D	T	X	N	F	W	I	E	G	K	P	E	E	L	K
Template Known Secondary structure									T	T	S	S										G	G	G	T	T							G	G	G	T	T		S						S	S										T	T		S	S		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																										.
Query SS confidence																					.	.	.	.	.																																										.
Query Sequence		T	L	V	P	H	L	D	F	A	F	A	S	A	P	Q	E	D	E	T	.	.	.	.	.	L	R	L	K	M	K	A	I	V	A	R	G	A	G	T	V	I	V	T	L	G	E	N	G	S	I	A	W	D	G	A	Q	F	W	R	Q	A	P	E	P	V	.	T	V	I	D	T	M	G	A	G	D	S	F	I	A
Query Conservation																					.	.	.	.	.																																										.
Alig confidence																					.	.	.	.	.																																										.
Template Conservation
Template Sequence		K	V	L	A	R	V	D	V	F	I	V	N	D	S	E	A	R	L	L	S	G	D	P	N	L	V	K	T	A	R	I	I	R	E	X	G	P	K	T	L	I	I	K	K	G	E	H	G	A	L	L	F	T	D	N	G	I	F	A	A	P	A	F	P	L	E	S	I	Y	D	P	T	G	A	G	D	T	F	A	G
Template Known Secondary structure					T	T		S														S		S											T	T	S		S							T	T	S							T	T									T	T				S			T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		229	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		G	F	L	C	G	W	S	A	G	M	T	L	.	.	.	.	.	P	Q	A	I	A	Q	G	T	A	C	A	A	K	T	I	Q	Y	H	G	A	W
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		G	F	I	G	H	L	A	R	C	G	N	T	S	E	A	E	X	R	K	A	V	L	Y	G	S	A	X	A	S	F	C	V	E	Q	F	G	P	Y
Template Known Secondary structure														S																			T	T	S	S	T	T	G
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions