Job Description Q6IFZ3 Confidence 97.57% Date Thu Jan 5 12:37:36 GMT 2012 Rank 61 Aligned Residues 117 % Identity 14% Template c3k5wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbohydrate kinase; PDBTitle: crystal structure of a carbohydrate kinase (yjef family)from2 helicobacter pylori Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.															.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	T	A	F	D	F	S	D	K	W	D	S	P	L	W	Q	T	L	V	P	H	L	D	F	A	F	A	S	A	P	Q	E	D	E	T	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	M	K	A	I	V	A	R	G	A	G	T	V	I	V	T	L	G	E	N	G	S	I	A	W	D	G
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																					.																																																				.
Template Sequence		A	P	C	V	L	D	A	G	V	F	Y	H	K	E	I	L	Q	A	L	.	E	K	E	A	V	L	T	P	H	P	K	E	F	L	S	L	L	N	L	V	G	I	N	I	S	X	L	E	L	L	D	N	K	L	A	R	D	F	S	Q	K	Y	P	K	V	V	L	L	L	K	G	.	A	N	T	L	I	A	H	Q
Template Known Secondary structure		S						G	G	G	G	G	S	G	G	G	G	T	T	T	.	T	S	S																	T	S					T	T	S	G	G	G	S											T	T							S	.	S	S						T
Template Predicted Secondary structure																					.																																																				.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	F	W	R	Q	A	P	E	P	V	T	V	I	D	T	M	G	A	G	D	S	F	I	A	G	F	L	C	G	W	S	A	G	M	T	L	P	Q	A	I	A	Q	G	T	A	C	A	A	K	T	I	Q	Y
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		G	Q	V	F	I	N	I	L	G	S	V	A	L	A	.	K	A	G	S	G	D	V	L	A	G	L	I	L	S	L	L	S	Q	N	Y	T	P	L	D	A	A	I	N	A	S	L	A	H	A	L	A	S	L	E
Template Known Secondary structure		T										G	G	G		.	S	T	T															T	T																	G	G	G	G
Template Predicted Secondary structure																.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions