Job Description Q6IFZ3 Confidence 99.72% Date Thu Jan 5 12:37:36 GMT 2012 Rank 45 Aligned Residues 213 % Identity 19% Template c2i5bC_ PDB info PDB header:transferase Chain: C: PDB Molecule:phosphomethylpyrimidine kinase; PDBTitle: the crystal structure of an adp complex of bacillus2 subtilis pyridoxal kinase provides evidence for the3 parralel emergence of enzyme activity during evolution Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		M	K	T	L	A	T	I	G	D	N	C	V	D	I	Y	P	Q	L	N	K	A	F	S	G	G	N	A	V	N	V	A	.	.	V	Y	C	T	R	Y	G	I	Q	P	G	C	I	T	W	V	G	D	D	D	Y	G	T	K	L	K	Q	D	L	A	R	M	G	V	D	I	S	H	V	H	T	K	H	G	V	T	A
Query Conservation																																	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.										.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	H	K	A	L	T	I	A	G	S	D	.	.	.	.	.	.	.	.	.	.	.	S	S	G	G	A	G	I	Q	A	D	L	K	T	F	Q	E	K	N	V	Y	G	M	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	S												T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.												.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																												.	.	.																																.	.	.	.
Query SS confidence																																												.	.	.																																.	.	.	.
Query Sequence		Q	T	Q	V	E	L	H	D	N	D	R	V	F	G	D	Y	T	E	G	V	M	A	D	F	A	L	S	E	E	D	Y	A	W	L	A	Q	Y	D	I	V	H	A	.	.	.	A	I	W	G	H	A	E	D	A	F	P	Q	L	H	A	A	G	K	L	T	A	F	D	F	S	D	K	W	D	S	P	.	.	.	.
Query Conservation																																												.	.	.																																.	.	.	.
Alig confidence																																												.	.	.																																.	.	.	.
Template Conservation
Template Sequence		T	V	I	V	A	M	D	P	N	N	S	W	N	H	Q	V	F	P	I	D	T	D	T	I	R	A	Q	L	A	T	I	T	D	G	I	G	V	D	A	M	K	T	G	M	L	P	T	V	D	I	I	E	L	A	A	K	T	I	K	E	K	Q	L	K	N	V	V	I	D	P	V	M	V	C	K	G	A	N	E	V
Template Known Secondary structure									T	T	T	T	T																					T	T	S			S									S														T	T		S	S								S	S	B		S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
										152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.												.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.							.	200	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	L	W	Q	T	L	V	P	H	L	D	F	A	F	A	S	A	P	Q	E	D	E	T	L	R	.	.	.	.	.	.	.	.	.	.	.	L	K	M	K	A	I	V	A	R	G	A	G	T	V	I	V	T	L	G	E	N	G	S	.	.	.	.	.	.	I	A	W	D	G	A	Q	F
Query Conservation		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	P	E	H	A	Q	A	L	R	E	Q	L	A	P	L	A	T	V	I	T	P	N	L	F	E	A	S	Q	L	S	G	M	D	E	L	K	T	V	D	D	M	I	E	A	A	K	K	I	H	A	L	G	A	Q	Y	V	V	I	T	G	G	G	K	L	K	H	E	K	A	V	D	V	L	Y	D	G	E	T	A
Template Known Secondary structure		S												T	G	G	G		S					B									T						S													T	T	T		S							G	G	G	S		S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	Q	A	P	E	P	V	T	V	I	D	T	M	G	A	G	D	S	F	I	A	G	F	L	C	G	W	S	A	G	M	T	L	P	Q	A	I	A	Q	G	T	A	C	A	A	K	T	I	Q	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	L	E	S	E	M	I	D	T	P	Y	T	H	G	A	G	C	T	F	S	A	A	V	T	A	E	L	A	K	G	A	E	V	K	E	A	I	Y	A	A	K	E	F	I	T	A	A	I	K	E
Template Known Secondary structure												S			B	T															T	T																				T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions