Job Description Q6IFZ3 Confidence 93.82% Date Thu Jan 5 12:37:36 GMT 2012 Rank 68 Aligned Residues 86 % Identity 17% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		M	K	T	L	A	T	I	G	D	N	C	V	D	I	Y	P	Q	L	N	K	A	F	S	G	G	N	A	V	N	V	.	A	V	Y	C	T	R	Y	G	I	Q	P	G	C	I	T	W	V	G	D	D	D	Y	G	T	K	L	K	Q	D	L	A	R	M	G	V	D	I	S	H	V	H	T	K	H	G	V	T	A	Q
Query Conservation																																.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.									.													.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	H	I	H	F	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	.	.	.	.	.	G	S	D	L	A	P	N	P	V	T	Q	Q	L	X	N	L	G	A	T	I	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	T	T											T	T					.	.	.	.	.				S	S											T	T				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.															.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		T	Q	V	E	L	H	D	N	D	R	V	F	G	D	Y	T	E	G	V	M	A	D	F	A	L	S	E	E	D	Y	A	W	L	A	Q	Y	D	I	V	H	A	A	I	W	.	G	H	A	E	D	A	F	P	Q	L	H	A	A	G	K	L	T	A
Query Conservation																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	S	A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			G	G	G	G	T	T		S						T	T			T	T										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions