Job Description Q6IFZ3 Confidence 100.00% Date Thu Jan 5 12:37:36 GMT 2012 Rank 23 Aligned Residues 261 % Identity 18% Template c2c49A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sugar kinase mj0406; PDBTitle: crystal structure of methanocaldococcus jannaschii2 nucleoside kinase - an archaeal member of the ribokinase3 family Resolution 1.92 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.															.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	T	L	A	T	I	G	D	N	C	V	D	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	L	N	K	A	F	S	G	G	N	A	V	N	V	A	V	Y	C	T	R	Y	G	I	Q	P	G	C	I	T	W	V	G	D	D	D	Y	G	T	K	L	K	Q	D	L	A	R	M	G	V	D
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	E	K	I	T	C	V	G	H	T	A	L	D	Y	I	F	N	V	E	K	F	P	E	P	N	T	S	I	Q	I	P	S	A	R	K	Y	Y	G	G	A	A	A	N	T	A	V	G	I	K	K	L	G	V	N	S	E	L	L	S	C	V	G	Y	D	F	K	N	S	G	Y	E	R	Y	L	K	N	L	D	I	N
Template Known Secondary structure									S											S	S				S	S						S																				T	T											T	T	T	T	T	S									T	T		B
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		I	S	H	V	H	T	K	H	G	V	T	A	Q	T	Q	V	E	L	H	D	N	D	R	V	F	G	D	Y	T	E	G	V	M	A	D	F	A	L	S	E	E	D	Y	A	W	L	A	Q	Y	D	I	V	H	A	A	I	W	G	H	A	E	D	A	F	P	Q	L	H	A	A	G	K	L	T	A	F	D	F	S	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		I	S	K	L	Y	Y	S	E	E	E	E	T	P	K	A	W	I	F	T	D	K	D	N	N	Q	I	T	F	F	L	W	G	A	A	K	H	Y	K	E	L	N	P	P	N	F	N	T	E	I	V	H	I	A	T	G	D	P	E	F	N	L	K	C	A	K	K	A	Y	G	N	N	L	V	S	F	D	P	G	Q	D
Template Known Secondary structure			T	T					S	S	S											T	T										G	G	G	G	G	G	G	G															S														B	T	T	B							G	G	G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
			146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.
Predicted Secondary structure		.																																	.	.																																						.
Query SS confidence		.																																	.	.																																						.
Query Sequence		.	D	K	W	D	S	P	L	W	Q	T	L	V	P	H	L	D	F	A	F	A	S	A	P	Q	E	D	E	T	L	R	L	K	.	.	M	K	A	I	V	A	R	G	A	G	T	V	I	V	T	L	G	E	N	G	S	I	A	W	D	G	A	Q	F	W	R	Q	A	P	E	P	V	.	T	V	I	D	T	M	G
Query Conservation		.																																	.	.																																						.
Alig confidence		.																																	.	.																																						.
Template Conservation
Template Sequence		L	P	Q	Y	S	K	E	M	L	L	E	I	I	E	H	T	N	F	L	F	M	N	K	H	E	F	E	R	A	S	N	L	L	N	F	E	I	D	D	Y	L	E	R	V	D	A	L	I	V	T	K	G	S	K	G	S	V	I	Y	T	K	D	K	K	I	E	I	P	C	I	K	A	G	K	V	I	D	P	T	G
Template Known Secondary structure		G	G	G											T	T		S																	T								T	T		S							G	G	G							S	S											S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	S	F	I	A	G	F	L	C	G	W	S	A	G	M	T	L	P	Q	A	I	A	Q	G	T	A	C	A	A	K	T	I	Q	Y	H	G	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	D	S	Y	R	A	G	F	L	S	A	Y	V	K	G	Y	D	L	E	K	C	G	L	I	G	A	A	T	A	S	F	V	V	E	A	K	G	C	Q
Template Known Secondary structure																T	T																		T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions