 |
Job Description | P0A9Y6 | Confidence | 99.90% | Date | Wed Jan 25 15:20:20 GMT 2012 |
Rank | 2 | Aligned Residues | 66 |
% Identity | 47% | Template | d1h95a_ |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | UNK |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | I | K | G | Q | V | K | W | F | N | E | S | K | G | F | G | F | I | T | P | A | D | G | S | K | D | V | F | V | H | F | S | A | I | Q | G | N | G | . |
. |
. |
. |
F | K | T | L | A | E | G | Q | N | V | E | F | E | I | Q | D | G | Q | K | G | P | A | A | V | N | V | T |
Query Conservation |   |
  |   |   |   |
|   |
|
|   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|   |   |   |   | . | . | . | . |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|
|   |
|   |   |   |
|
|
|
|
|
|   |   |
|   |
|   |   |
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
Template Sequence |   |
T | K | V | L | G | T | V | K | W | F | N | V | R | N | G | Y | G | F | I | N | R | N | D | T | K | E | D | V | F | V | H | Q | T | A | I | K | K | N | N | P | R | K | Y | L | R | S | V | G | D | G | E | T | V | E | F | D | V | V | E | G | E | K | G | A | E | A | A | N | V | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  | G | G | G | B |
| S |
|
|
| S |
|
| S |
| S |
|
| S | S |
|  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  | S | B |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|