Job Description P37009 Confidence 97.96% Date Thu Jan 5 11:54:22 GMT 2012 Rank 118 Aligned Residues 157 % Identity 17% Template c3ldaA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad51; PDBTitle: yeast rad51 h352y filament interface mutant Resolution 2.50 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		I	P	Q	G	Q	M	V	T	L	L	G	P	S	G	C	G	K	T	T	I	L	R	L	V	A	.	.	.	.	.	.	G	L	E	K	P	S	E	G	Q	I	F	I	D	G	E	D	V	T	H	R	S	I	Q	Q	R	D	I	C	M	V	F	Q	S	Y	A	L	F	P	H	M	S	L	G	E	N	V	G	Y	G
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																													.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	G	T	F	R	P	V	R	L	V	S	I	A	.	.	.	.	Q	R	F	G	L	D	P	D	D	A	L	N	N	V	A	Y	A
Template Known Secondary structure				T	T	S							S	T	T	S	S												T	T	S		G	G	G	T			S	S							S	S	S												.	.	.	.			T	T									T
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		L	K	M	L	G	V	P	R	A	E	L	K	A	R	V	K	E	A	L	A	M	V	D	L	E	.	G	F	E	D	R	F	V	D	Q	I	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	I	L	K	P	K	V	L	L	F	D	E	P	L	S	N	L	D	A	N	L	R	R	S	M	R	D	K	I	R	E
Query Conservation																											.
Alig confidence																											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	G	E	L	S	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	M	H	L	A	K	F	M	R	A	L	Q	R
Template Known Secondary structure					S																		S									T	G	G	G	G									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																									.	.	.	.	.	.	300	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	K	Q	F	D	I	T	S	L	Y	V	T	H	D	Q	S	E	A	F	A	V	S	D	T	V	L	V	M	N	K	G	H
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	.	V	N	I	M	A	Y	S	S	T	T	R	L	G	F	K	K	G	K
Template Known Secondary structure																.									S									S
Template Predicted Secondary structure																.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions