Job Description P37009 Confidence 100.00% Date Thu Jan 5 11:54:22 GMT 2012 Rank 10 Aligned Residues 337 % Identity 24% Template c3gd7C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp) Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.
Predicted Secondary structure												.	.																																																										.	.
Query SS confidence												.	.																																																										.	.
Query Sequence		V	E	L	R	N	V	T	K	R	F	.	.	G	S	N	T	V	I	D	N	I	N	L	T	I	P	Q	G	Q	M	V	T	L	L	G	P	S	G	C	G	K	T	T	I	L	R	L	V	A	G	L	E	K	P	S	E	G	Q	I	F	I	D	G	E	D	V	T	H	R	.	.	S	I	Q	Q	R	D	I	C	M
Query Conservation												.	.																																																										.	.
Alig confidence												.	.																																									.																	.	.
Template Conservation																																																						.
Template Sequence		M	T	V	K	D	L	T	A	K	Y	T	E	G	G	N	A	I	L	E	N	I	S	F	S	I	S	P	G	Q	R	V	G	L	L	G	R	T	G	S	G	K	S	T	L	L	S	A	F	L	R	L	L	.	N	T	E	G	E	I	Q	I	D	G	V	S	W	D	S	I	T	L	E	Q	W	R	K	A	F	G	V
Template Known Secondary structure											S	S	T	T	S													T	T									T	T	S	S									T	T		S	.									T	T			S	S	S	S						G	G	G
Template Predicted Secondary structure																																																						.
Template SS confidence
		1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.		.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		V	F	Q	S	Y	A	L	F	P	H	M	S	L	G	E	N	V	G	Y	G	L	K	M	L	G	V	P	R	A	E	.	.	.	.	L	K	A	R	V	K	E	A	L	A	M	V	D	L	E	G	F	E	D	R	F	V	D	Q	I	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	I	L	K	P	K	V	L
Query Conservation																																.	.	.	.
Alig confidence												.																				.	.	.	.
Template Conservation												.
Template Sequence		I	P	Q	K	V	F	I	F	S	G	.	T	F	R	K	N	L	D	P	N	A	A	H	S	D	Q	E	I	W	K	V	A	D	E	V	G	L	R	S	V	I	E	Q	F	P	G	K	L	D	F	V	L	V	D	G	G	C	V	L	S	H	G	H	K	Q	L	M	C	L	A	R	S	V	L	S	K	A	K	I	L
Template Known Secondary structure			S							S	S	.	B							T	T	S		S										T	T	T	T		T	T	T	G	G	G	S	T	T	G	G	G		B			T	T	T	T	T	S																T	T
Template Predicted Secondary structure												.
Template SS confidence
		1289	1290	.	.	.	.	.	.	.	.		.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	D	E	P	L	S	N	L	D	A	N	L	R	R	S	M	R	D	K	I	R	E	L	Q	K	Q	F	D	I	T	S	L	Y	V	T	H	D	Q	S	E	A	F	A	V	S	D	T	V	L	V	M	N	K	G	H	I	M	Q	I	G	S	P	Q	D	L	Y	R	Q	P	A	S	R	F	M	A	S	F	M	G
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		L	L	D	E	P	S	A	H	L	D	P	V	T	Y	Q	I	I	R	R	T	L	K	Q	A	.	.	.	F	A	D	C	T	V	I	L	C	E	A	R	I	E	A	M	L	E	C	D	Q	F	L	V	I	E	E	N	K	V	R	Q	Y	D	S	I	L	E	L	Y	H	Y	P	A	D	R	F	V	A	G	F	I	G
Template Known Secondary structure					S					S															T	.	.	.	T	T	T	S							S	S	G	G	G	S	T	T		S							S	S						S										S	B					T	T	S	S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		1368	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.				.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.
		239	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.												.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure				.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	.	.	N	L	F	P	A	T	F	S	D	G	Y	V	D	I	Y	G	Y	H	L	P	R	P	L	.	.	.	.	.	.	.	.	.	.	.	H	F	G	T	Q	G	E	G	M	V	G	V	R	P	E	A	I	T	L	S	D	R	G	E	E	S	Q	R	C	V	I	R	H	V	A	Y	M	G	P	Q	Y	E
Query Conservation				.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	K	M	N	F	L	P	V	K	V	T	A	T	A	I	D	Q	V	Q	V	E	L	P	M	P	N	R	Q	Q	V	W	L	P	V	E	S	R	D	V	Q	V	G	A	N	M	S	L	G	I	R	P	E	H	L	L	P	S	D	I	A	D	V	I	L	E	G	E	V	Q	V	V	E	Q	L	G	N	E	T	Q
Template Known Secondary structure		S	S														T	T							S	S	T	T							S	B			T	T			T	T									T	T	T				G	G	G		S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		1445	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.
		306	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	T	V	E	.	W	H	G	Q	E	I	L	L	Q	V	N	A	T	R	L	Q	P	D	V	G	E	Q	Y	Y	L	E	I	H	P	Y	G	M	F	V	L	A	D	A	A
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		I	H	I	Q	I	P	S	I	R	Q	N	L	V	Y	R	Q	N	D	V	V	L	V	E	E	G	A	T	F	A	I	G	L	P	P	E	R	C	H	L	F	R	E	D	G
Template Known Secondary structure							T	T		S	S								S						T	T									G	G	G						T	T	S
Template Predicted Secondary structure
Template SS confidence
		1525	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions