Job Description P37009 Confidence 100.00% Date Thu Jan 5 11:54:22 GMT 2012 Rank 46 Aligned Residues 220 % Identity 33% Template c3b5wE_ PDB info PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba Resolution 5.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																																														.
Query SS confidence																		.	.																																																														.
Query Sequence		M	T	Q	K	N	F	V	E	L	R	N	V	T	K	R	F	.	.	G	S	N	T	V	I	D	N	I	N	L	T	I	P	Q	G	Q	M	V	T	L	L	G	P	S	G	C	G	K	T	T	I	L	R	L	V	A	G	L	E	K	P	S	E	G	Q	I	F	I	D	G	E	D	V	T	H	R	S	I	Q	Q	.
Query Conservation																		.	.																																																														.
Alig confidence																		.	.																																																														.
Template Conservation
Template Sequence		E	R	A	T	G	D	V	E	F	R	N	V	T	F	T	Y	P	G	R	D	V	P	A	L	R	N	I	N	L	K	I	P	A	G	K	T	V	A	L	V	G	R	S	G	S	G	K	S	T	I	A	S	L	I	T	R	F	Y	D	I	D	E	G	E	I	L	M	D	G	H	D	L	R	E	Y	T	L	A	S	L
Template Known Secondary structure				S							S	S		B		B		S	S	S	S		B	S	S		S							T	T							S	S	T	T	S	S								T	T	T		S			B	S	S					S	S	S	B	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
			78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.												.	.	140	.	.	.	.	.
Predicted Secondary structure		.																																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	R	D	I	C	M	V	F	Q	S	Y	A	L	F	P	H	M	S	L	G	E	N	V	G	Y	G	L	K	M	L	G	V	P	R	A	E	L	K	A	R	V	K	E	A	L	A	M	V	D	L	E	G	F	E	D	R	F	V	D	Q	I	.	.	.	.	.	.	.	.	.	.	.	S	G	G	Q	Q	Q	R	V
Query Conservation		.																																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																.											.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.											.	.	.	.	.
Template Sequence		R	N	Q	V	A	L	V	S	Q	N	V	H	L	F	N	D	.	T	V	A	N	N	I	A	Y	A	R	.	.	.	.	.	T	E	Q	Y	S	R	E	Q	I	E	E	A	A	R	M	A	Y	A	M	D	F	I	N	K	M	D	N	G	L	D	T	V	I	G	E	N	G	V	L	L	S	G	G	Q	R	Q	R	I
Template Known Secondary structure			T	T						S						S	S	.		B	S	T	T	T	T	S	S	S	.	.	.	.	.	S	T	T	S			T	T					T	T	T	T	S	T					T	T	S	S	S	S	S	B					T	T	S		S	S
Template Predicted Secondary structure																		.											.	.	.	.	.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.						.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	R	A	L	I	L	K	P	K	V	L	L	F	D	E	P	L	S	N	L	D	A	N	L	R	R	S	M	R	D	K	I	R	E	L	Q	K	Q	F	D	I	T	S	L	Y	V	T	H	D	Q	S	E	A	F	A	V	S	D	T	V	L	V	M	N	K	G	H	I	M	Q	I	G	S	P	Q	D	L	Y
Query Conservation
Alig confidence																																							.	.																	.
Template Conservation																																							.	.																	.
Template Sequence		A	I	A	R	A	L	L	R	D	S	P	I	L	I	L	D	E	A	T	S	A	L	D	T	E	S	E	R	A	I	Q	A	A	L	D	E	L	.	.	Q	K	N	R	T	S	L	V	I	A	H	R	L	S	T	I	.	E	K	A	D	E	I	V	V	V	E	D	G	V	I	V	E	R	G	T	H	N	D	L	L
Template Known Secondary structure			T					T	S			S							T	T	S	S									T	T					T	T	.	.	T	S	S	S							S	S	G	G	G	T	.	T	T		S	S	B					T	T							S	S	S
Template Predicted Secondary structure																																							.	.																	.
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.			.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.		.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		226	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	R	G
Template Known Secondary structure			S		S
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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