Job Description P37009 Confidence 100.00% Date Thu Jan 5 11:54:22 GMT 2012 Rank 57 Aligned Residues 225 % Identity 24% Template c2ygrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra Resolution 3.40 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		R	N	V	T	K	R	F	G	S	N	T	V	I	D	N	I	N	L	T	I	P	Q	G	Q	M	V	T	L	L	G	P	S	G	C	G	K	T	T	I	L	R	.	.	L	V	A	G	L	E	K	P	S	E	G	Q	I	F	I	D	G	E	D	V	T	H	R	S	I	Q	Q	R	D	I	C	M	V	F	Q	S	Y
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		R	Q	L	T	V	V	G	A	R	E	H	N	L	R	G	I	D	V	S	F	P	L	G	V	L	T	S	V	T	G	V	S	G	S	G	K	S	T	L	V	N	D	I	L	A	A	V	L	A	N	R	L	N	G	A	R	Q	V	P	G	R	H	T	R	V	T	G	L	D	Y	L	D	K	L	V	R	I	D	Q	S
Template Known Secondary structure		S									S	T	T			S							S	S	S							S	T	T	S	S								T									T	S								S	S						G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
		88	.																																																															90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	H	M	S	L	G	E	N	V	G	Y	G	L	K	M
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	G	R	T	P	R	S	N	P	A	T	Y	T	G	V	F	D	K	I	R	T	L	F	A	A	T	N	E	A	K	V	R	G	Y	K	P	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	T	G	D	G	T	I	K	I	E	M	N	F	L	P	D	V	Y	V	P	C	E	V	C	Q	G	A	R	Y
Template Known Secondary structure			S		S	S	T	T		S						T											T	S					T	T	T			G	G	G	S		T	T	S	T	T	T	B		S	S	S	T	T	S	S							S	S	S								T	T	T	T	S		S	B
Template Predicted Secondary structure
Template SS confidence
		705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
		106																											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																									.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																									.	.	.
Query Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	P	R	A	E	L	K	A	R	V	K	E	A	L	A	M	V	D	L	E	G	F	E	.	D	R	F	V	D	Q	I	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	I	L	K	.	.	.	P
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																									.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																									.	.	.
Template Conservation
Template Sequence		N	R	E	T	L	E	V	H	Y	K	G	K	T	V	S	E	V	L	D	M	S	I	E	E	A	A	E	F	F	E	P	I	A	G	V	H	R	Y	L	R	T	L	V	D	V	G	L	G	Y	V	R	L	G	Q	P	A	P	T	L	S	G	G	E	A	Q	R	V	K	L	A	S	E	L	Q	K	R	S	T	G	R
Template Known Secondary structure							T			B	T	T	B							T	S	B								S	T	T														S	S		S	S	S	B	T	T			G	G	G	S														S	S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.
Query Sequence		K	V	L	L	F	D	E	P	L	S	N	L	D	A	N	L	R	R	S	M	R	D	K	I	R	E	L	Q	K	Q	F	D	I	T	S	L	Y	V	T	H	D	Q	S	E	A	F	A	V	S	D	T	V	L	V	M	.	.	.	.	.	.	N	K	G	H	I	M	Q	I	G	S	P	Q	D	L	Y	R	Q	P	A
Query Conservation																																																									.	.	.	.	.	.
Alig confidence																																.															.										.	.	.	.	.	.
Template Conservation																																.															.
Template Sequence		T	V	Y	I	L	D	E	P	T	T	G	L	H	F	D	D	I	R	K	L	L	N	V	I	N	G	L	V	D	K	.	G	N	T	V	I	V	I	E	H	N	L	D	V	I	.	K	T	S	D	W	I	I	D	L	G	P	E	G	G	A	G	G	G	T	V	V	A	Q	G	T	P	E	D	V	A	A	V	P	A
Template Known Secondary structure								S	S	S	T	T																				.	T														.				S							S	S	S	T	T	S		S						S						T	T		S	S
Template Predicted Secondary structure																																.															.
Template SS confidence
		865	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.		.	.	.	.	.	900	.	.	.	.	.	.	.	.		.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.
		230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	F	M	A	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	T	G	K	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		943	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions