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Job DescriptionP37009
Confidence96.65%DateThu Jan 5 11:54:22 GMT 2012
Rank241Aligned Residues125
% Identity14%Templatec2j37W_
PDB info PDB header:ribosomeChain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs
Resolution8.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.........90.........100.....
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Query Sequence  NLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKM
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Template Sequence  AWTPTKGNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   93......100.........110.........120.........130.........140
 
   106...110.........120.........130.........140.........150.........160.... .....170.........180....
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Query Sequence  LGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPL. SNLDANLRRSMRDKIRELQK
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Template Sequence  . . . . . . GAFDQLKQNATKARIPFYGSYTEMDPV. . IIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAI. .
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   143......150.........160......... 170.........180.........190.........200.........210..
 
   185....190...
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Query Sequence  QFDITSLYV
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Template Sequence  . QPDNIVYV
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   213......220
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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