Job Description P37009 Confidence 96.95% Date Thu Jan 5 11:54:22 GMT 2012 Rank 189 Aligned Residues 107 % Identity 18% Template c1xx6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: x-ray structure of clostridium acetobutylicum thymidine kinase with2 adp. northeast structural genomics target car26. Resolution 2.00 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		P	Q	G	Q	M	V	T	L	L	G	P	S	G	C	G	K	T	T	.	I	L	R	L	V	A	G	L	E	K	P	S	E	G	Q	I	F	I	D	G	E	D	V	T	H	R	S	I	Q	Q	R	D	I	C	M	V	F	Q	S	Y	A	L	F	P	H	M	S	L	G	E	N	V	G	Y	G	L	K	M	L	G	V
Query Conservation																				.
Alig confidence																				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	H	G	W	V	E	V	I	V	G	P	X	Y	S	G	K	S	E	E	L	I	R	R	I	R	R	A	K	I	A	K	Q	K	I	Q	V	F	K	P	E	A	V	A	I	K	N	S	R	E	I	L	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T										S	T	T	S	S															T	T														S	S	S	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	A	E	L	K	A	R	V	K	E	A	L	A	M	V	D	L	E	G	F	E	D	R	F	V	D	Q	I	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	I	L	K	P	K	V	L	L	F	D	E	P	L	S	N	L	D	A	N	L	R	R	S	M	R	D	K	I	R	E	L	Q	K	Q	F	D	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.						.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.						.	.	.	.											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	D	T	E	V	I	A	I	D	E	.	V	Q	F	F	D	.	.	.	.	D	E	I	V	E	I	V	N	K	I	.	A	E	S	G	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		S						S	.	G	G	G	S		.	.	.	.	T										.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.						.	.	.	.											.
Template SS confidence
																																												78	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.					.	.	.	.	.	100	.	.	.	.		.	.	.	.	.
		189	190	.	.	.	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	L	Y	V	T	H	D	.	.	.	.	.	.	.	.	.	.	Q	S	E	A	F	A	V	S	D	T	V	L	V	M	N
Query Conservation										.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	I	C	A	G	L	D	X	D	F	R	G	K	P	F	G	P	I	P	E	L	X	A	I	A	E	F	V	D	K	I	Q
Template Known Secondary structure									S	B		T	T	S		B		T	T									S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions