Job Description P37009 Confidence 95.71% Date Thu Jan 5 11:54:22 GMT 2012 Rank 367 Aligned Residues 156 % Identity 12% Template c1kk3A_ PDB info PDB header:translation Chain: A: PDB Molecule:eif2gamma; PDBTitle: structure of the wild-type large gamma subunit of2 initiation factor eif2 from pyrococcus abyssi complexed3 with gdp-mg2+ Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		V	T	L	L	G	P	S	G	C	G	K	T	T	I	L	R	L	V	A	G	L	.	.	.	.	.	.	.	E	K	P	S	E	G	Q	I	F	I	D	G	E	D	V	T	H	R	S	I	Q	Q	R	D	I	C	M	V	F	Q	S	Y	A	L	F	P	H	M	S	L	G	E	N	V	G	Y	G	L	K	M	L	G
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																																						.									.	.	.
Template Conservation																																																																			.									.	.	.
Template Sequence		I	G	M	V	G	H	V	D	H	G	K	T	T	L	T	K	A	L	T	G	V	W	T	D	S	E	E	L	R	R	G	I	T	I	K	I	G	F	A	D	A	E	I	R	R	C	P	N	C	G	R	Y	S	T	S	P	V	C	P	Y	C	G	H	E	T	.	E	F	V	R	R	V	S	F	.	.	.	I	D	A
Template Known Secondary structure						S	S	T	T	S	S										T							T	T	S	S		S	S	S													T	T	T					S	S	S	B		T	T	T			B		.									.	.	.
Template Predicted Secondary structure																																																																			.									.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.				.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	P	R	A	E	L	K	A	R	V	K	E	A	L	A	M	V	D	L	E	G	F	E	D	R	F	V	D	Q	I	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	I	L	K	P	K	V	L	L	F	D	E	P	L	S	N	L	D	A	N	L	R	R	S	M	R	D	K	I	R	E	L	Q	K	Q	F	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		P	G	H	E	A	L	M	T	T	M	L	A	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	R	P	Q	T	R	E	H	L	M	A	L	Q	I	I	G	Q	K	N	I	I	I	A	Q	N	K	I	E	L	V	D	K	E	K	A	L	E	N	Y	R	Q	I	K	E	F	I	E	G	T	V
Template Known Secondary structure		S	S												G	G	G		S								T	T	S		S																T											G	G	G	S																	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
				187	.	.	190	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	I	T	S	L	Y	V	T
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	E	N	A	P	I	I	P	I	S
Template Known Secondary structure		T	T	T							B
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions