Job Description P32674 Confidence 26.44% Date Thu Jan 5 11:50:01 GMT 2012 Rank 30 Aligned Residues 65 % Identity 18% Template c3odeA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: human parp-1 zinc finger 2 (zn2) bound to dna Resolution 2.95 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																										.	.	.																													.	.	.	.	.	.	.
Query SS confidence																										.	.	.																													.	.	.	.	.	.	.
Query Sequence		L	E	H	V	E	I	S	I	R	D	E	E	L	I	A	G	N	R	T	V	K	P	R	A	.	.	.	G	I	M	S	P	E	M	D	P	Y	W	L	L	K	E	L	D	Q	F	P	T	R	P	Q	D	R	F	A	.	.	.	.	.	.	.	I	S	E	E	D	K	R	I	Y	R	E	E	L
Query Conservation																										.	.	.																													.	.	.	.	.	.	.
Alig confidence																										.	.	.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	K	G	C	M	E	K	I	E	K	G	Q	V	R	L	S	K	K	M	V	D	P	E	K	P	Q	L	G	M	I	D	R	W	Y	H	P	G	C	F	V	K	N	R	E	E	L	G	F	R	P	E	Y	S	A	S	Q	L	K	G	F	S	L	L	A	T	E	D	K	E	A	L	K	K	Q	L
Template Known Secondary structure			T	T	T			B			T	T											S	S		G	G	G															T	T	T	T	T	T			T	T	T	G	G	G	G			T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions