Return to main results Retrieve Phyre Job Id

Job DescriptionP32674
Confidence50.53%DateThu Jan 5 11:50:01 GMT 2012
Rank17Aligned Residues61
% Identity23%Templatec2d2rA_
PDB info PDB header:transferaseChain: A: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of helicobacter pylori undecaprenyl pyrophosphate2 synthase
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   693......700.........710........ .720.........730.........740.........750.......
Predicted Secondary structure 




........








Query SS confidence 

























. . . . . . . .






































Query Sequence  GLRKLADFLRAFTQLKLQHIQFNVVN. . . . . . . . ADTLREAQQRPQDYAGLVVRVAGYSAFFVELSKEIQDDI
Query Conservation 
   
  


  
  

 







........ 


  


 

 
  









 
  
    



Alig confidence 

























........













.







...












Template Conservation 
   
  

 

   

  



 


  
  
               . 


   
...
   

  
    
Template Sequence  GVKTLKDITIWCANHKLECLTLYAFEVDFLMKMLKKYLKDERSTYLDN. NIRFRAIG. . . DLEGFSKELRDTI
Template Known Secondary structure  TTT
S


T.T
S...
GGGS
Template Predicted Secondary structure 




.


...



Template SS confidence 








































































   33......40.........50.........60.........70.........80 ........ .90.........100.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions