 |
Job Description | P32674 | Confidence | 39.12% | Date | Thu Jan 5 11:50:01 GMT 2012 |
Rank | 24 | Aligned Residues | 64 |
% Identity | 11% | Template | c1jp3A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase; |
PDBTitle: structure of e.coli undecaprenyl pyrophosphate synthase
|
Resolution | 1.80 Å |
|
 |
  |   |
691 | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | |
|
|
. | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . |
|  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | G | L | R | K | L | A | D | F | L | R | A | F | T | Q | L | K | L | Q | H | I | Q | F | N | V | V | N | A | D | T | L | R | E | A | Q | Q | . |
. |
. |
R | P | Q | D | Y | A | G | L | V | V | R | V | A | G | Y | S | A | F | F | V | E | L | S | K | E | I | Q | D | D | I |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|
|
| . | . | . |   |
|
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|
|   |   |
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
| . | . | . |   |   |   |   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
K | A | G | A | K | S | V | R | R | A | V | S | F | A | A | N | N | G | I | E | A | L | T | L | Y | A | F | S | X | E | L | F | V | W | A | L | D | S | E | V | K | S | L | H | R | H | N | V | R | L | R | I | I | G | . |
. |
. |
D | T | S | R | F | N | S | R | L | Q | E | R | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S | . | . | . |
|
| T | T | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . | . | . |
|  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|