Return to main results Retrieve Phyre Job Id

Job DescriptionQ47622
Confidence86.42%DateThu Jan 5 12:36:57 GMT 2012
Rank29Aligned Residues56
% Identity11%Templated1sw5a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   383......390.........400.........410...... ...420.........430........
Predicted Secondary structure 








..






Query SS confidence 

































. .





















Query Sequence  PTRSQAWNPSPLKTAELIQADMAQVGVKVVIVPV. . EGRFQEARLMDMSHDLTLSGWA
Query Conservation                
  
   
   

 
 
   ..              
     
 
Alig confidence 

































..





















Template Conservation 
 

   
    
 
 
    

  

 
              

  




  
 

Template Sequence  VVIGSKPFNEQYILANMIAILLEENGYKAEVKEGLGGTLVNYEALKRNDIQLYVEYTG
Template Known Secondary structure 


SSTT


TT

STSSS
Template Predicted Secondary structure 


















Template SS confidence 

























































   8.10.........20.........30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions