Job Description Q47622 Confidence 93.86% Date Thu Jan 5 12:36:57 GMT 2012 Rank 25 Aligned Residues 83 % Identity 17% Template c3chgB_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:glycine betaine-binding protein; PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		362	.	.	.	.	.	.	.	370										.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		A	K	S	R	E	Q	L	K	S	.	.	.	.	.	.	.	.	.	L	G	L	E	N	L	T	L	K	L	W	V	P	T	R	S	Q	A	W	N	P	S	P	L	K	T	A	E	L	I	Q	A	D	M	A	Q	V	G	V	K	V	V	I	V	P	V	E	G	R	F	Q	E	A	R	L	M	D	M	S	H	D	L
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.										.									.
Template Conservation																													.									.
Template Sequence		K	V	A	A	E	Y	V	N	K	H	K	D	Q	I	A	E	W	T	K	G	V	Q	K	V	K	G	D	.	K	I	N	L	A	Y	V	A	.	W	D	S	E	I	A	S	T	N	V	I	G	K	V	L	E	D	L	G	Y	E	V	T	L	T	Q	V	E	A	G	P	M	W	T	A	I	A	T	G	S	A	D	A
Template Known Secondary structure																			T	T	T					S	S		.									.																	T	T	T										T	T								T	T	S	S	S
Template Predicted Secondary structure																													.									.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		433	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	S	G	W	A	T	D	S	N	D	P	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	S	A	W	L	P	N	T	H	K	A	Y	A
Template Known Secondary structure								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions