Return to main results Retrieve Phyre Job Id

Job DescriptionP25522
Confidence99.44%DateThu Jan 5 11:41:55 GMT 2012
Rank178Aligned Residues154
% Identity15%Templated2fg5a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240.........250.........260.........270.........280.........290......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQA
Query Conservation 
 
 


 









 
     
 

   


 
         
  
 
 



        
             
Alig confidence 
































































.......







Template Conservation   

 


   






                                                .......        
Template Sequence  LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSL. . . . . . . APMYYRGS
Template Known Secondary structure 
TTSS



TT



SS
SSS

SGGGGGG.......TTT
Template Predicted Secondary structure 


































.......







Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70 ........
 
   297..300.........310.........320.... .....330.........340. ........350.........360........
Predicted Secondary structure 






.









.......









Query SS confidence 



























.
















. . . . . . .


























Query Sequence  DRVLFMVDGTTTDAVDPAEIWPEFIARL. PAKLPITVVRNKADITG. . . . . . . ETLGMSEVNGHALIRLSARTGEGVDVL
Query Conservation 



 




                  .    




 

 

  .......             
 





 

  
Alig confidence 



























.
















.......


























Template Conservation                                                                     
 




 

 
 
Template Sequence  AAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEEL
Template Known Secondary structure  STT
TS
TT

GGGGGG

S
TTT

BTTTTBS
Template Predicted Secondary structure 










































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   369370.......
Predicted Secondary structure 
Query SS confidence 








Query Sequence  RNHLKQSMG
Query Conservation     
   
 
Alig confidence 








Template Conservation 
  
   

Template Sequence  FQGISRQIP
Template Known Secondary structure  T

Template Predicted Secondary structure 

Template SS confidence 








   159160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions