Return to main results Retrieve Phyre Job Id

Job DescriptionP25522
Confidence96.63%DateThu Jan 5 11:41:55 GMT 2012
Rank345Aligned Residues111
% Identity18%Templated1vpla_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230.........240.........250.........260..... ....270.....
Predicted Secondary structure 


























............




.....
Query SS confidence 




















































. . . . . . . . . . . .









. . . . .
Query Sequence  LREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP. . . . . . . . . . . . LHIIDTAGLR. . . . .
Query Conservation 
  

 
 


 









 
     
 

   


 
         
  ............
 
 



  .....
Alig confidence 




























............











............









.....
Template Conservation 
  

   
 
 








  
 
   ............   
 
 
 
             
    
        

Template Sequence  IEEGEIFGLIGPNGAGKTTTLRIISTLIK. . . . . . . . . . . . PSSGIVTVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQG
Template Known Secondary structure 
TT


TTSSTTSS
............
STTTTT
TT
TT



TTSB
Template Predicted Secondary structure 













............





















Template SS confidence 















































































   26...30.........40.........50.... .....60.........70.........80.........90...
 
   276...280.........290.........300.........310......
Predicted Secondary structure  .......................................











Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .








































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEI
Query Conservation  .......................................      
             




 




          
Alig confidence  .......................................






















.
















Template Conservation   
 
                          
          

 
  


 

 

   
 
.





   

      
Template Sequence  IEYLRFVAGFYASSSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRL. AILDEPTSGLDVLNARE
Template Known Secondary structure 




GGGGGSBGGG

TT

S.STTTT

Template Predicted Secondary structure 

















.






Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150..... ....160.........170..
 
   317..320.........330......
Predicted Secondary structure 




Query SS confidence 



















Query Sequence  WPEFIARLPAKLPITVVRNK
Query Conservation              




 

Alig confidence 



















Template Conservation 
   
      
 


  

Template Sequence  VRKILKQASQEGLTILVSSH
Template Known Secondary structure  TT

Template Predicted Secondary structure 



Template SS confidence 



















   173......180.........190..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions