Return to main results Retrieve Phyre Job Id

Job DescriptionP25522
Confidence96.10%DateThu Jan 5 11:41:55 GMT 2012
Rank395Aligned Residues112
% Identity14%Templated1svma_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.94

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150.........160.........170.........180.........190...
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  RAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQL
Query Conservation 


 


 

 




  

 
 
      
   
 
 
       
  
    
 


 


 

             
Alig confidence 






















..



























.........

















Template Conservation   


 





 


 
 


 
..

     

 

 
  
     
   
 .........    
  

      
  
Template Sequence  AIFADSKNQKTICQQAVDTVLAK. . KRVDSLQLTREQMLTNRFNDLLDRMDIM. . . . . . . . . FGSTGSADIEEWMAGVAW
Template Known Secondary structure  TT
S
..S
.........TSTT



Template Predicted Secondary structure 



..

.........






Template SS confidence 















































































   325....330.........340....... ..350.........360.........370..... ....380.........390...
 
   194..... 200.........210.........220.........230........
Predicted Secondary structure  .....









Query SS confidence 





. . . . .






































Query Sequence  NDVIAD. . . . . LDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAG
Query Conservation    
   .....
  

        
  

 
 


 









 
  
Alig confidence 





.....















..




















Template Conservation                 

  
   


 ..     


  


     
  
Template Sequence  LHCLLPKMDSVVYDFLKCMVYNIPKKR. . YWLFKGPIDSGKTTLAAALLE
Template Known Secondary structure  TTTSTT

TT

..
STTSS
Template Predicted Secondary structure 










..





Template SS confidence 

















































   394.....400.........410.........420 .........430.........440.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions