Return to main results Retrieve Phyre Job Id

Job DescriptionP25522
Confidence99.38%DateThu Jan 5 11:41:55 GMT 2012
Rank205Aligned Residues141
% Identity20%Templated1ky3a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240.........250.........260.........270.........280.........290......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQA
Query Conservation 
 
 


 









 
     
 

   


 
         
  
 
 



        
             
Alig confidence 
























.
































..................


Template Conservation   

 


   






  
     .                                 ..................   
Template Sequence  LKVIILGDSGVGKTSLMHRYVNDKY. SQQYIGADFLTKEVTVDGDKVATMQVWDTAAFY. . . . . . . . . . . . . . . . . . RGA
Template Known Secondary structure 

TTSSS

.
TT



S


SSS






S..................TT
Template Predicted Secondary structure 








.

















..................


Template SS confidence 















































































   910.........20.........30... ......40.........50.........60...... ...
 
   297..300.........310.........320..... ....330.........340. ........350.........360..
Predicted Secondary structure 






.....









.........







Query SS confidence 




























. . . . .















. . . . . . . . .




















Query Sequence  DRVLFMVDGTTTDAVDPAEIWPEFIARLP. . . . . AKLPITVVRNKADITG. . . . . . . . . ETLGMSEVNGHALIRLSARTG
Query Conservation 



 




                   .....   




 

 

  .........             
 





Alig confidence 




























.....















.........




















Template Conservation                                       




 

 

                         
 

   
Template Sequence  DCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNA
Template Known Secondary structure 
TT
T

S
TTT


TTS
GGG

S
TTS

BTTTT
Template Predicted Secondary structure 


































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   363......370......
Predicted Secondary structure 

Query SS confidence 













Query Sequence  EGVDVLRNHLKQSM
Query Conservation   

  
   
   
Alig confidence 













Template Conservation   

 
 
  
    
Template Sequence  INVDTAFEEIARSA
Template Known Secondary structure  BS
Template Predicted Secondary structure 

Template SS confidence 













   163......170......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions