Return to main results Retrieve Phyre Job Id

Job DescriptionP25522
Confidence98.72%DateThu Jan 5 11:41:55 GMT 2012
Rank267Aligned Residues56
% Identity38%Templatec4a2iV_
PDB info PDB header:ribosome/hydrolaseChain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor
Resolution16.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250.........260.........270........
Predicted Secondary structure 


































Query SS confidence 































































Query Sequence  EGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREAS
Query Conservation   

 
 


 









 
     
 

   


 
         
  
 
 



     
Alig confidence 



























.....
















...










Template Conservation          
 









 

    
.....  

       
  
  ...





     
Template Sequence  TGRISIFAGQSGVGKSSLLNALLGLQNE. . . . . ILTNTAARLYHFPHGGD. . . VIDSPGVREFG
Template Known Secondary structure  TTS

TTSS

SS
.....







TTS
...
T

Template Predicted Secondary structure 














.....





...







Template SS confidence 































































   214.....220.........230.........240. ........250........ .260.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions