Job Description P25522 Confidence 99.31% Date Thu Jan 5 11:41:55 GMT 2012 Rank 234 Aligned Residues 230 % Identity 19% Template c3zvrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of dynamin Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																				.	.																																																								.	.	.	.	.
Query SS confidence																				.	.																																																								.	.	.	.	.
Query Sequence		L	N	D	V	I	A	D	L	D	A	V	R	A	E	A	R	Q	G	.	.	S	L	L	R	E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	.	.	.	.	.
Query Conservation																				.	.																																																								.	.	.	.	.
Alig confidence																				.	.																																						.																		.	.	.	.	.
Template Conservation																																																											.
Template Sequence		M	E	D	L	I	P	L	V	N	R	L	Q	D	A	F	S	A	I	G	Q	N	A	D	L	D	L	P	Q	I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	V	G	R	D	F	L	P	R	G	S	G	.	I	V	T	R	R	P	L	V	L	Q	L	V	N	S	T	T	E	Y	A	E	F	L
Template Known Secondary structure		G	G	G														T	T	T			G	G	G			S								T	T	T											S	S			S			S	S	S	.		S		S	S										S	S						S
Template Predicted Secondary structure																																																											.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
																																																	266	.	.	.	270	.	.	.	.	.	.	.	.						.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	I	I	D	T	A	G	L	R	E	A	S	.	.	.	.	.	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		H	C	K	G	K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	G	T	N	K	G	I	S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	M	T	K	V	P	V	G	D	Q	P	P	D	I	E	F	Q	I	R	D	M	L	M	Q	F	V
Template Known Secondary structure		T	T	T	T			B																				S	T	T				S										T	T			S														S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		294	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure						.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	A	D	.	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		T	K	E	N	C	L	I	L	A	V	S	P	A	N	S	D	L	A	N	S	D	A	.	.	L	K	I	A	K	E	V	D	P	Q	G	Q	R	T	I	G	V	I	T	K	L	D	L	M	D	E	G	T	D	A	R	D	V	L	E	N	K	L	L	P	L	R	R	G	Y	I	G	V	V	N	R	S	Q	K	D	I
Template Known Secondary structure		T	S	T	T									T	T	S		S	S	S				.	.									T	T		S	S								T	T	S	S		T	T			S					T	T		S	S			S	S													S
Template Predicted Secondary structure																								.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
												343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	T	L	G	M	S	E	V	N	G	H	A	L	I	R	L	S	A	R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G	F	D	T	N	M	E	G	G	F	L	A	R	R	R	H	L	Q	A	L	E	Q	A	A	E	H	L	Q	Q	G	K	A	Q	L	L	G
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		D	G	K	K	D	I	T	A	A	L	A	A	E	R	K	F	F	L	S	H	P	S	Y	R	H	L	A	.	D	R	M	G	T	P	Y	L	Q	K	V	L	N	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	H	I	R	D	T	L	P	G	L	R	N	K	L	Q	S	Q	.	.
Template Known Secondary structure		S	S	S																		T	T	T	G	G	G	G	.	G	G		S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Predicted Secondary structure																													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.																	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		A	W	A	G	E	L	L	A	E	E	L	R	L	A	Q	Q	N	L	S	E	I	T	G	E	F	T	S	D	D	L	.	.	L	G	R	I	F	S	S	F	C
Query Conservation																																.	.
Alig confidence		.	.	.	.	.	.	.																								.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	L	S	I	E	K	E	V	D	E	Y	K	N	F	R	P	D	D	P	A	R	K	T	K	A	L	L	Q	M	V	Q	Q	F	A
Template Known Secondary structure		.	.	.	.	.	.	.																		S	S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions