Job Description P25522 Confidence 99.91% Date Thu Jan 5 11:41:55 GMT 2012 Rank 19 Aligned Residues 257 % Identity 20% Template c3nxsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:lao/ao transport system atpase; PDBTitle: crystal structure of lao/ao transport system from mycobacterium2 smegmatis bound to gdp Resolution 2.30 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		E	E	I	D	F	L	S	D	G	K	I	E	A	Q	L	N	D	V	I	A	D	L	D	A	V	R	A	E	A	R	Q	G	S	L	L	R	E	.	.	.	.	.	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D
Query Conservation																																							.	.	.	.	.
Alig confidence																																							.	.	.	.	.
Template Conservation
Template Sequence		Q	S	I	R	D	G	D	R	S	A	L	A	R	A	I	T	L	V	E	S	T	R	A	D	H	R	E	Q	A	Q	Q	L	L	L	D	L	M	P	E	A	G	S	A	M	H	V	G	I	T	G	V	P	G	V	G	K	S	T	T	I	E	A	L	G	M	H	L	I	E	A	G	H	R	V	A	V	L	A	V	D
Template Known Secondary structure							T																S														T	T	T	T	T	T		S									T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.																				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	W	Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	M	A	R	L	A	V	H	P	D	A	Y	I	R	P	S	P	T	S	G	T	L	G	G	V	A	K	A	T	R	E	T	I	V	L	L	E	A	A	G	Y	D	V	I	L	V	E	T	V	G	V	G	Q	S	E	V	T	V	A	G	M	V	D	T	F	V	F	L	T	L	A	R	T	G	D	Q	L	Q	G	I
Template Known Secondary structure										T	T										S																			T	T												T	T							T	T		S									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E	T	L	G	M	S	E	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	A	L	I	R	L	S	A	R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G	F
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	K	G	V	L	E	L	A	D	V	I	V	V	N	K	A	D	G	E	H	A	V	E	A	K	A	A	A	R	E	L	S	G	A	I	R	L	I	Y	P	R	E	S	L	W	R	P	P	V	L	T	M	S	A	V	E	G	T	G	L	P	E	L	W	E	T	V	L	R	H	R	E	V
Template Known Secondary structure		.	.	.	.	.	.	.		T	T		G	G	G		S									G	G	G																			S		T	T		S										T	T	T		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	N	M	E	G	G	F	L	A	R	R	R	H	L	Q	A	L	E	Q	A	A	E	H	L	Q	Q	G	K	A	Q	L	L	G	A	W	A	G	E	L	L	A	E	E	L	R	L	A	Q	Q	N	L	S	E	I	T	G	E	F	T	S	D	D	L	L	G
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		L	E	E	.	.	A	G	E	F	E	A	R	R	R	T	Q	Q	V	E	W	T	W	S	M	V	R	D	A	V	L	D	R	V	M	N	H	P	E	V	R	R	I	R	D	D	V	E	Q	R	V	R	L	G	E	L	T	P	A	L	A	A	Q	E	I	L	D
Template Known Secondary structure					.	.	T	T																												T																	T	T	S	S
Template Predicted Secondary structure					.	.
Template SS confidence
		260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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