Job Description P25522 Confidence 99.38% Date Thu Jan 5 11:41:55 GMT 2012 Rank 203 Aligned Residues 160 % Identity 19% Template c3mmpC_ PDB info PDB header:transferase Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Q	G	S	L	L	R	E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I
Query Conservation
Alig confidence																																			.	.	.	.												.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.												.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		A	A	M	S	K	Q	S	K	P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	.	.	.	.	L	A	K	T	Y	G	G	T	S	H	V	.	.	.	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	.	.	.	.	.	.	.	.	H	A	D	Y	V
Template Known Secondary structure																				T	T	S													.	.	.	.												.	.	.					S	S											.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.												.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.									.	.	.	.	340
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.																350
Predicted Secondary structure																																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	A	W	Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	.	I	T	V	V	R	N	K	A	D	I	T	G	E	T	L	G	M	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Query Conservation																																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.
Template Sequence		K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	.	.	.	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D
Template Known Secondary structure							T	S				S								T	T	T				T	T								.	.	.				T	T		S									G	G	G																					T	T	S		G	G
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.				.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.									.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.
Query Sequence		G	H	A	L	I	R	L	S	A	R	T	G	.	.	.	.	.	.	.	.	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G	F	D	T	N	M	E	G
Query Conservation														.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P	E	P	E	R	A	I	D
Template Known Secondary structure		G														T																			S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		1166	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions