Job Description P25522 Confidence 99.09% Date Thu Jan 5 11:41:55 GMT 2012 Rank 253 Aligned Residues 153 % Identity 9% Template c3l82B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex Resolution 2.40 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.											.
Query SS confidence																																											.	.	.	.	.											.
Query Sequence		R	E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	.	.	.	.	.	L	R	E	H	I	H	I	D	G	M	.	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E
Query Conservation																																											.	.	.	.	.											.
Alig confidence																														.													.	.	.	.	.											.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	E	P	R	F	A	X	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	X	S	S	E	.	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	P	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												G	G	G	T	S	S	S	S								T			.	S	S							G	G	G			T	T	S								S	S	S	S									S					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.						.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.										350	.	.
Predicted Secondary structure																																								.	.	.	.	.											.															.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.											.															.	.	.	.	.	.	.	.	.
Query Sequence		R	A	W	Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	.	.	.	.	.	A	K	L	P	I	T	V	V	R	N	.	K	A	D	I	T	G	E	T	L	G	M	S	E	V	.	.	.	.	.	.	.	.	.	N	G	H
Query Conservation																																								.	.	.	.	.											.															.	.	.	.	.	.	.	.	.
Alig confidence		.																																						.	.	.	.	.											.															.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	I	Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	X	A	X	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	X	P	C	F	Y	L	A	H	E	L	H	L	N	L	L	N	H	P	W
Template Known Secondary structure		.									S									B	T	T																S		T	T	S	S		S		S									S	S	T	T	S		B										T	T	G	G	G	G		S
Template Predicted Secondary structure		.
Template SS confidence
			279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	R	L	S	A	R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V	E	S	K
Template Known Secondary structure								T	T	T		T	T									T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions