Job Description P25522 Confidence 99.79% Date Thu Jan 5 11:41:55 GMT 2012 Rank 43 Aligned Residues 161 % Identity 19% Template c3izyP_ PDB info PDB header:rna, ribosomal protein Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial; PDBTitle: mammalian mitochondrial translation initiation factor 2 Resolution 10.80 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	R	E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	.	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q
Query Conservation																																																			.
Alig confidence																															.																				.																				.	.	.	.	.	.	.	.
Template Conservation																															.																																								.	.	.	.	.	.	.	.
Template Sequence		I	P	R	S	P	V	V	T	I	M	G	H	V	D	H	G	K	T	T	L	L	D	K	L	R	K	T	Q	V	.	A	A	M	E	A	G	G	I	T	Q	H	I	G	A	F	L	V	S	L	P	S	G	E	K	I	T	F	L	D	T	P	G	H	A	A	F	S	A	M	.	.	.	.	.	.	.	.	R	A	R
Template Known Secondary structure							B						S	T	T	T	T														.			S	S	S			B				T	T	S			B		S	S		S	S			B					S	S	S			T	T	T	S	.	.	.	.	.	.	.	.	B	B	S
Template Predicted Secondary structure																															.																																								.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.									.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.						.	.	.	.	.	.	350	.	.	.									.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.											.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.											.	.	.	.	.	.	.	.
Query Sequence		E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E	T	.	.	.	.	.	L	G	M	S	E	V	N	G	H	A	.	.	.	.	.	.	.	.	L	I	R	L	S
Query Conservation																																																						.	.	.	.	.											.	.	.	.	.	.	.	.
Alig confidence																														.	.	.																						.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																														.	.	.
Template Sequence		G	T	Q	V	T	D	I	V	I	L	V	V	A	A	D	D	G	V	M	K	Q	T	V	E	S	I	Q	H	.	.	.	A	K	D	A	H	V	P	I	V	L	A	I	N	K	C	D	K	A	E	A	D	P	E	K	V	K	K	E	L	L	A	Y	D	V	V	C	E	D	Y	G	G	D	V	Q	A	V	H	V	S
Template Known Secondary structure		S	S	B	S	B	S	S						B	S	S	S													.	.	.			T	T	T								B	S	G	G	G	T	T	T	S			S	S	S	S					T	T	S					S	S	S	S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G	F	D	T	N	M	E	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	T	G	E	N	M	M	A	L	A	E	A	T	I	A	L	A	E	M	L	E	L	K	A	D	P
Template Known Secondary structure		S	S	S	S		S	S												T	T							S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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