Job Description P25522 Confidence 99.94% Date Thu Jan 5 11:41:55 GMT 2012 Rank 11 Aligned Residues 201 % Identity 26% Template c3ievA_ PDB info PDB header:nucleotide binding protein/rna Chain: A: PDB Molecule:gtp-binding protein era; PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna Resolution 1.90 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.														.	.
Query SS confidence																																																					.														.	.
Query Sequence		L	R	E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	.	M	P	L	H	I	I	D	T	A	G	L	R	E	.	.	A	S	D	E	V	E	R	I	G	I	E	R	A
Query Conservation																																																					.														.	.
Alig confidence							.																																														.														.	.
Template Conservation							.
Template Sequence		M	K	V	G	Y	.	V	A	I	V	G	K	P	N	V	G	K	S	T	L	L	N	N	L	L	G	T	K	V	S	I	I	S	P	K	A	G	T	T	R	M	R	V	L	G	V	K	N	I	P	N	E	A	Q	I	I	F	L	D	T	P	G	I	Y	E	P	K	K	S	D	V	L	G	H	S	M	V	E	I	A
Template Known Secondary structure							.						S	T	T	S	S										T	S			S				S	S	S					S									T	T	T																T	T
Template Predicted Secondary structure							.
Template SS confidence
		1	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.										350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E	T	L	G	M	S	E	V	.	.	.	.	.	.	.	.	.	N	G	H	A	L	I	R	L	S	A	R
Query Conservation																																																														.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		K	Q	S	L	E	E	A	D	V	I	L	F	M	I	D	A	T	E	G	W	R	P	R	D	E	E	I	Y	Q	N	.	.	F	I	K	P	L	N	K	P	V	I	V	V	I	N	K	I	D	K	I	G	P	A	K	N	V	L	P	L	I	D	E	I	H	K	K	H	P	E	L	T	E	I	V	P	I	S	A	L
Template Known Secondary structure									S								T	T	T	B	S											.	.		T	G	G	G											G	G	G	S	S	S	G	G	G	G												T	T								B	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G	F	D	T	N	.	M	E	G	G	F	L	A	R	R	R	H	L	Q	A	L	E	Q	A	A	E	H	L	Q	Q	G	K	A	Q	L	L	G	A	W	A	G	E	L
Query Conservation																							.
Alig confidence																							.																					.	.
Template Conservation																																												.	.
Template Sequence		K	G	A	N	L	D	E	L	V	K	T	I	L	K	Y	L	P	E	G	E	P	L	F	P	E	D	M	I	T	D	L	P	L	R	L	L	A	A	E	I	V	R	.	.	E	K	A	M	M	L	T	R	E	E	V	P	T	S	I
Template Known Secondary structure		T	T	B	S												S		B				S	S		T	T			B														.	.						T			T	T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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